RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SUMO4Q6EEV6 95 aa6.43□□□□□ -1.38
CCDC47-207ENST00000612558 RPL39LQ96EH5 51 aaKnown RBP6.43□□□□□ -1.38
CCDC47-207ENST00000612558 ZMAT5Q9UDW3 170 aaKnown RBP6.43□□□□□ -1.38
CCDC47-207ENST00000612558 SCGB1D1O95968 90 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 APOC4P55056 127 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 KRTDAPP60985 99 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
CCDC47-207ENST00000612558 LGALS9BQ3B8N2 356 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 SMIM2Q9BVW6 85 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 NIT2Q9NQR4 276 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 MRPL16Q9NX20 251 aaKnown RBP6.42□□□□□ -1.38
CCDC47-207ENST00000612558 HSPB8Q9UJY1 196 aa6.42□□□□□ -1.38
CCDC47-207ENST00000612558 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 TRBV6-5A0A0K0K1A5 114 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 H7C1H1 209 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 K7EMI3 77 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 M0QY20 66 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 RHODO00212 210 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 RS1O15537 224 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 C3orf79P0CE67 100 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
CCDC47-207ENST00000612558 EGFEM1PQ0D2K5 195 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 UFSP1Q6NVU6 142 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 EDA2RQ9HAV5 297 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
CCDC47-207ENST00000612558 A0A096LNJ9 63 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 TRGV1A0A0A0MS02 117 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 PLAC8L1A1L4L8 177 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 SMIM9A6NGZ8 99 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 HBDP02042 147 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 BTF3P20290 206 aaKnown RBP6.4□□□□□ -1.38
CCDC47-207ENST00000612558 FCER1GP30273 86 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 LAGE3Q14657 143 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 ZFP2Q6ZN57 461 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 OVOL2Q9BRP0 275 aa6.4□□□□□ -1.38
CCDC47-207ENST00000612558 NOP10Q9NPE3 64 aaKnown RBP6.4□□□□□ -1.38
CCDC47-207ENST00000612558 IGHV3-73A0A0B4J1V6 119 aa6.4□□□□□ -1.39
CCDC47-207ENST00000612558 VCYO14598 125 aa6.4□□□□□ -1.39
CCDC47-207ENST00000612558 TCAPO15273 167 aa6.4□□□□□ -1.39
CCDC47-207ENST00000612558 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.39
CCDC47-207ENST00000612558 OR4C5Q8NGB2 326 aa6.4□□□□□ -1.39
CCDC47-207ENST00000612558 TMEM70Q9BUB7 260 aa6.4□□□□□ -1.39
CCDC47-207ENST00000612558 ANK2Q01484 3957 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 SDHAF1A6NFY7 115 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 IGHV4-30-4P0DP06 118 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 KRTAP10-11P60412 298 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 S100A12P80511 92 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 ORMDL2Q53FV1 153 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 Q6ZTI0 123 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 LINC00173Q6ZV60 143 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
CCDC47-207ENST00000612558 TRAV4A0A0B4J268 109 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 TRBV27A0A0K0K1C4 114 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 CIDEAO60543 219 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 IGHV3-53P01767 116 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 Q8N976 141 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 KIR2DL4Q99706 377 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 X6R8D5 127 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 DNAH3Q8TD57 4116 aa6.38□□□□□ -1.39
CCDC47-207ENST00000612558 A8MZ25 164 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 NUDT3O95989 172 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 G0S2P27469 103 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 Q6ZSN1 163 aa6.37□□□□□ -1.39
CCDC47-207ENST00000612558 TRGV2A0A075B6R0 118 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 C20orf202A1L168 122 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 GAGE7O76087 117 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 GAGE12FP0CL80 117 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 GAGE12GP0CL81 117 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 GAGE12IP0CL82 117 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 TEX43Q6ZNM6 134 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 IFI27L1Q96BM0 104 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 ZNF479Q96JC4 524 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 DNAJC30Q96LL9 226 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 PKD1L1Q8TDX9 2849 aa6.36□□□□□ -1.39
CCDC47-207ENST00000612558 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 G3V4G9 280 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 I3L3M4 83 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 ATP5LO75964 103 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 P0DMU3 169 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 FAM231AP0DMU4 169 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 FAM231CP0DMU5 169 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 EMP1P54849 157 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 NEGR1Q7Z3B1 354 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 OR11H2Q8NH07 326 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 RNF183Q96D59 192 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 MIFP14174 115 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 RHOHQ15669 191 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 LINC00612Q8N6U2 182 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 NEXN-AS1Q8NBZ9 246 aa6.35□□□□□ -1.39
CCDC47-207ENST00000612558 C18orf15Q96N68 181 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms