RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 TTTY13Q9BZ97 58 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 K7EP34 96 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 TNFRSF6BO95407 300 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 IGKV2D-26A0A0A0MRZ7 120 aa13.33□□□□□ -0.28
SNAPC3-207ENST00000610884 FAM74A4Q5TZK3 123 aa13.33□□□□□ -0.28
SNAPC3-207ENST00000610884 CITED1Q99966 193 aa13.33□□□□□ -0.28
SNAPC3-207ENST00000610884 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 MGPP08493 103 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 ODF1Q14990 250 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 OR2K2Q8NGT1 345 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 PRSS1P07477 247 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 AZU1P20160 251 aa13.32□□□□□ -0.28
SNAPC3-207ENST00000610884 IGHV3-16A0A0C4DH30 117 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 FCER1GP30273 86 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 LINC01587Q99440 93 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 IGHV3-73A0A0B4J1V6 119 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 GCSHP23434 173 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 TMEM158Q8WZ71 300 aa13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 NXT2Q9NPJ8 142 aaKnown RBP13.31□□□□□ -0.28
SNAPC3-207ENST00000610884 A0A1W2PPM0 123 aa13.3□□□□□ -0.28
SNAPC3-207ENST00000610884 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
SNAPC3-207ENST00000610884 SPCS1Q9Y6A9 102 aa13.3□□□□□ -0.28
SNAPC3-207ENST00000610884 NOTCH1P46531 2555 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 RIPPLY3P57055 190 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 IGKCP01834 107 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 FXYD2P54710 66 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 GTSCR1Q86UQ5 136 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 RPL39LQ96EH5 51 aaKnown RBP13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 ODF3Q96PU9 254 aa13.29□□□□□ -0.28
SNAPC3-207ENST00000610884 LINC01546A6NGU7 62 aa13.28□□□□□ -0.28
SNAPC3-207ENST00000610884 CHAC1Q9BUX1 264 aa13.28□□□□□ -0.28
SNAPC3-207ENST00000610884 CSTL1Q9H114 145 aa13.28□□□□□ -0.28
SNAPC3-207ENST00000610884 ZMAT4Q9H898 229 aa13.28□□□□□ -0.28
SNAPC3-207ENST00000610884 ANK2Q01484 3957 aa13.28□□□□□ -0.28
SNAPC3-207ENST00000610884 K7ERJ3 54 aa13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 TRPT1Q86TN4 253 aaKnown RBP13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 GIG44P09565 113 aaPredicted RBP13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 BEAN1Q3B7T3 259 aa13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 ZNF876PQ49A33 203 aa13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 ZC2HC1BQ5TFG8 222 aa13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 NEGR1Q7Z3B1 354 aa13.27□□□□□ -0.29
SNAPC3-207ENST00000610884 SMIM13P0DJ93 91 aa13.26□□□□□ -0.29
SNAPC3-207ENST00000610884 C1orf158Q8N1D5 194 aa13.26□□□□□ -0.29
SNAPC3-207ENST00000610884 F5H697 171 aa13.25□□□□□ -0.29
SNAPC3-207ENST00000610884 FABP2P12104 132 aa13.25□□□□□ -0.29
SNAPC3-207ENST00000610884 Q8N8P6 123 aa13.25□□□□□ -0.29
SNAPC3-207ENST00000610884 DPM2O94777 84 aa13.25□□□□□ -0.29
SNAPC3-207ENST00000610884 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
SNAPC3-207ENST00000610884 IGHV4-4A0A075B6R2 117 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 K7EMI3 77 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 OR5A1Q8NGJ0 315 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 Q9UF83 564 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 TRBV25-1A0A075B6N4 114 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 SMIM17P0DL12 118 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 OXLD1Q5BKU9 147 aa13.24□□□□□ -0.29
SNAPC3-207ENST00000610884 A8MTW9 85 aa13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 G3V4G9 280 aa13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 MRPL35Q9NZE8 188 aaKnown RBP13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 HIGD1BQ9P298 99 aa13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 ATP5LO75964 103 aa13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 MRPL16Q9NX20 251 aaKnown RBP13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 NHP2Q9NX24 153 aaKnown RBP13.23□□□□□ -0.29
SNAPC3-207ENST00000610884 NRACQ8N912 160 aa13.22□□□□□ -0.29
SNAPC3-207ENST00000610884 INSP01308 110 aa13.22□□□□□ -0.29
SNAPC3-207ENST00000610884 LINC00315P59091 139 aa13.22□□□□□ -0.29
SNAPC3-207ENST00000610884 RASL10AQ92737 203 aa13.21□□□□□ -0.29
SNAPC3-207ENST00000610884 DPH3P1Q9H4G8 78 aa13.21□□□□□ -0.29
SNAPC3-207ENST00000610884 KIF25-AS1Q9Y6Z4 181 aa13.21□□□□□ -0.29
SNAPC3-207ENST00000610884 LAGE3Q14657 143 aa13.21□□□□□ -0.29
SNAPC3-207ENST00000610884 C3orf56Q8N813 242 aa13.21□□□□□ -0.29
SNAPC3-207ENST00000610884 P0DMU3 169 aa13.2□□□□□ -0.3
SNAPC3-207ENST00000610884 FAM231AP0DMU4 169 aa13.2□□□□□ -0.3
SNAPC3-207ENST00000610884 FAM231CP0DMU5 169 aa13.2□□□□□ -0.3
SNAPC3-207ENST00000610884 CMYA5Q8N3K9 4069 aa13.2□□□□□ -0.3
SNAPC3-207ENST00000610884 EMP1P54849 157 aa13.2□□□□□ -0.3
SNAPC3-207ENST00000610884 CEND1Q8N111 149 aa13.19□□□□□ -0.3
SNAPC3-207ENST00000610884 CRYGDP07320 174 aa13.19□□□□□ -0.3
SNAPC3-207ENST00000610884 MAPKAPK5-AS1Q8N8E1 139 aa13.19□□□□□ -0.3
SNAPC3-207ENST00000610884 ZNF56Q15929 161 aa13.18□□□□□ -0.3
SNAPC3-207ENST00000610884 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
SNAPC3-207ENST00000610884 C11orf72Q8NBR9 251 aa13.18□□□□□ -0.3
SNAPC3-207ENST00000610884 PHLDA1Q8WV24 401 aaPredicted RBP13.18□□□□□ -0.3
SNAPC3-207ENST00000610884 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
SNAPC3-207ENST00000610884 RPL24P83731 157 aaKnown RBP13.17□□□□□ -0.3
SNAPC3-207ENST00000610884 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
SNAPC3-207ENST00000610884 Q6ZSN1 163 aa13.17□□□□□ -0.3
SNAPC3-207ENST00000610884 TRGV11A0A075B6L2 103 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 A0A087WX48 190 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 IGHV3-53P01767 116 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 TM2D2Q9BX73 214 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 NXPH4O95158 308 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
SNAPC3-207ENST00000610884 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
SNAPC3-207ENST00000610884 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms