RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.398e-10■■■■□ 22.5
TNIP1-220ENST00000610535 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
TNIP1-220ENST00000610535 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
TNIP1-220ENST00000610535 LRRK2Q5S007 2527 aa12.6□□□□□ -0.39
TNIP1-220ENST00000610535 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
TNIP1-220ENST00000610535 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
TNIP1-220ENST00000610535 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
TNIP1-220ENST00000610535 SLC25A20O43772 301 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 ZNF56Q15929 161 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 IGHV1-69P01742 117 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 P0DMU3 169 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 FAM231AP0DMU4 169 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 FAM231CP0DMU5 169 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
TNIP1-220ENST00000610535 LGALS9O00182 355 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 IGHV3-33P01772 117 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 USMG5Q96IX5 58 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 DAZ1Q9NQZ3 744 aaKnown RBP12.58□□□□□ -0.4
TNIP1-220ENST00000610535 BEX4Q9NWD9 120 aaPredicted RBP12.58□□□□□ -0.4
TNIP1-220ENST00000610535 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 M0QY20 66 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 ELANEP08246 267 aa12.58□□□□□ -0.4
TNIP1-220ENST00000610535 Q1RN00 199 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
TNIP1-220ENST00000610535 ZNF462Q96JM2 2506 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 TRBV6-5A0A0K0K1A5 114 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 ADARB2-AS1A8MUL3 147 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
TNIP1-220ENST00000610535 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 H3BUX3 64 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 LEPROTO15243 131 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 ERG28Q9UKR5 140 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 IGHG2P01859 326 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
TNIP1-220ENST00000610535 IGHV4-39P01824 125 aa12.55□□□□□ -0.4
TNIP1-220ENST00000610535 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
TNIP1-220ENST00000610535 Q8N1Y9 231 aa12.55□□□□□ -0.4
TNIP1-220ENST00000610535 EPG5Q9HCE0 2579 aa12.55□□□□□ -0.4
TNIP1-220ENST00000610535 RHODO00212 210 aa12.54□□□□□ -0.4
TNIP1-220ENST00000610535 C9orf85Q96MD7 179 aa12.54□□□□□ -0.4
TNIP1-220ENST00000610535 VCX2Q9H322 139 aa12.54□□□□□ -0.4
TNIP1-220ENST00000610535 ID1P41134 155 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 NTN5Q8WTR8 489 aaPredicted RBP12.53□□□□□ -0.4
TNIP1-220ENST00000610535 ABCA12Q86UK0 2595 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 NSUN5P1Q3KNT7 163 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 PRORYQ9H606 182 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 SPXQ9BT56 116 aa12.53□□□□□ -0.4
TNIP1-220ENST00000610535 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
TNIP1-220ENST00000610535 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
TNIP1-220ENST00000610535 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
TNIP1-220ENST00000610535 NRGNQ92686 78 aa12.52□□□□□ -0.41
TNIP1-220ENST00000610535 IGLV4-3A0A075B6K6 122 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 H3BUA1 57 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 RHOHQ15669 191 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 CUBNO60494 3623 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 A0A0B4J2C4 111 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 TMEM262E9PQX1 116 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 IGLV1-40P01703 118 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 SS18L2Q9UHA2 77 aa12.51□□□□□ -0.41
TNIP1-220ENST00000610535 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 A6NDX4 124 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 CRLF1O75462 422 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 RNASE13Q5GAN3 156 aaKnown RBP12.5□□□□□ -0.41
TNIP1-220ENST00000610535 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
TNIP1-220ENST00000610535 TEX49A0A1B0GTD5 131 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 BRI3O95415 125 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 PRSS2P07478 247 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 NPC2P61916 151 aa12.5□□□□□ -0.41
TNIP1-220ENST00000610535 PRRC2AP48634 2157 aaKnown RBP12.49□□□□□ -0.41
TNIP1-220ENST00000610535 TRAV8-3A0A0A6YYJ7 113 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 I3L3M4 83 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 M0R2P5 195 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 PRB1P04280 392 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 IGHV3-30-3P0DP02 117 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 LINC01620Q4KN68 170 aa12.49□□□□□ -0.41
TNIP1-220ENST00000610535 A0A0J9YX75 114 aa12.48□□□□□ -0.41
TNIP1-220ENST00000610535 C10orf99Q6UWK7 81 aa12.48□□□□□ -0.41
TNIP1-220ENST00000610535 CITED1Q99966 193 aa12.48□□□□□ -0.41
TNIP1-220ENST00000610535 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
TNIP1-220ENST00000610535 FBN2P35556 2912 aa12.48□□□□□ -0.41
TNIP1-220ENST00000610535 K7EMT4 169 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 TRIAP1O43715 76 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 PROK1P58294 105 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 Q6ZSV7 163 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 HTN1P15515 57 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
TNIP1-220ENST00000610535 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms