RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 DAZ3Q9NR90 486 aaKnown RBP10.1□□□□□ -0.79
LMBR1-220ENST00000609081 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
LMBR1-220ENST00000609081 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
LMBR1-220ENST00000609081 MUC21A0A0G2JKD1 596 aa10.09□□□□□ -0.79
LMBR1-220ENST00000609081 MUC21A0A140T8X8 626 aa10.09□□□□□ -0.79
LMBR1-220ENST00000609081 DNAJC30Q96LL9 226 aa10.09□□□□□ -0.79
LMBR1-220ENST00000609081 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 HSPG2P98160 4391 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 GZMBP10144 247 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
LMBR1-220ENST00000609081 CTRLP40313 264 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 SSTP61278 116 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 Q0VG73 95 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 Q8N814 137 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 OCC1Q8TAD7 63 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
LMBR1-220ENST00000609081 RPP21Q9H633 154 aaKnown RBP10.07□□□□□ -0.8
LMBR1-220ENST00000609081 GCSHP23434 173 aa10.06□□□□□ -0.8
LMBR1-220ENST00000609081 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
LMBR1-220ENST00000609081 Q8N1X5 172 aa10.06□□□□□ -0.8
LMBR1-220ENST00000609081 Q8N3U1 123 aa10.06□□□□□ -0.8
LMBR1-220ENST00000609081 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
LMBR1-220ENST00000609081 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
LMBR1-220ENST00000609081 M0QY20 66 aa10.05□□□□□ -0.8
LMBR1-220ENST00000609081 MGPP08493 103 aa10.05□□□□□ -0.8
LMBR1-220ENST00000609081 NTF3P20783 257 aa10.05□□□□□ -0.8
LMBR1-220ENST00000609081 KLK12Q9UKR0 248 aa10.05□□□□□ -0.8
LMBR1-220ENST00000609081 TMEM262E9PQX1 116 aa10.04□□□□□ -0.8
LMBR1-220ENST00000609081 K7EN84 100 aa10.04□□□□□ -0.8
LMBR1-220ENST00000609081 ATRAIDQ6UW56 229 aa10.04□□□□□ -0.8
LMBR1-220ENST00000609081 FAM231DQ6ZW35 169 aa10.04□□□□□ -0.8
LMBR1-220ENST00000609081 FRZBQ92765 325 aa10.04□□□□□ -0.8
LMBR1-220ENST00000609081 EIF5A2Q9GZV4 153 aaKnown RBP10.04□□□□□ -0.8
LMBR1-220ENST00000609081 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
LMBR1-220ENST00000609081 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
LMBR1-220ENST00000609081 PCLOQ9Y6V0 5065 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 TRBV25-1A0A075B6N4 114 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 A8MWL6 223 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 CT83Q5H943 113 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 SUMO4Q6EEV6 95 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 RASL11AQ6T310 242 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 UBE2WQ96B02 151 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 FAM210AQ96ND0 272 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
LMBR1-220ENST00000609081 CRPP02741 224 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
LMBR1-220ENST00000609081 TWIST1Q15672 202 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 IQCJQ1A5X6 159 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 TMEM70Q9BUB7 260 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 NIT2Q9NQR4 276 aa10.02□□□□□ -0.81
LMBR1-220ENST00000609081 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 IGHV1-24A0A0C4DH33 117 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 GATCO43716 136 aaKnown RBP10.01□□□□□ -0.81
LMBR1-220ENST00000609081 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.81
LMBR1-220ENST00000609081 KRTAP10-1P60331 282 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 Q8N976 141 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 PGLYRP4Q96LB8 373 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 SMIM7Q9BQ49 75 aa10.01□□□□□ -0.81
LMBR1-220ENST00000609081 A0A1B0GVG6 124 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 MIAQ16674 131 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 MPV17L2Q567V2 206 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 TEX261Q6UWH6 196 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 NTM-AS1Q6ZSK4 140 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 C1orf43Q9BWL3 253 aa10□□□□□ -0.81
LMBR1-220ENST00000609081 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
LMBR1-220ENST00000609081 CEBPGP53567 150 aa9.99□□□□□ -0.81
LMBR1-220ENST00000609081 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
LMBR1-220ENST00000609081 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
LMBR1-220ENST00000609081 FAM231BA6NCW3 169 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 XGP55808 180 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 FAM74A3Q4VXF1 159 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 BORCS7Q96B45 105 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 GFRA4Q9GZZ7 299 aa9.98□□□□□ -0.81
LMBR1-220ENST00000609081 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
LMBR1-220ENST00000609081 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
LMBR1-220ENST00000609081 BAALCQ8WXS3 180 aa9.97□□□□□ -0.81
LMBR1-220ENST00000609081 OSTCQ9NRP0 149 aa9.97□□□□□ -0.81
LMBR1-220ENST00000609081 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
LMBR1-220ENST00000609081 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.82
LMBR1-220ENST00000609081 RBX1P62877 108 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 COTL1Q14019 142 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 WFDC2Q14508 124 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 TSKUQ8WUA8 353 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 TMEM243Q9BU79 118 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.82
LMBR1-220ENST00000609081 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
LMBR1-220ENST00000609081 LECT2O14960 151 aa9.95□□□□□ -0.82
LMBR1-220ENST00000609081 GAGE6Q13070 117 aa9.95□□□□□ -0.82
LMBR1-220ENST00000609081 NCR2O95944 276 aa9.94□□□□□ -0.82
LMBR1-220ENST00000609081 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms