RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TRAV4A0A0B4J268 109 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 G3V4G9 280 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 IGHV3-53P01767 116 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 Q6ZSN1 163 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 ORMDL2Q53FV1 153 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 MAP1LC3CQ9BXW4 147 aa15.45■□□□□ 0.06
USP6NL-204ENST00000606752 TRBV27A0A0K0K1C4 114 aa15.44■□□□□ 0.06
USP6NL-204ENST00000606752 A8MZ25 164 aa15.44■□□□□ 0.06
USP6NL-204ENST00000606752 Q8N976 141 aa15.44■□□□□ 0.06
USP6NL-204ENST00000606752 MDFIQ99750 246 aa15.44■□□□□ 0.06
USP6NL-204ENST00000606752 NACAE9PAV3 2078 aa15.44■□□□□ 0.06
USP6NL-204ENST00000606752 ZNF479Q96JC4 524 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 GAGE12BA1L429 117 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 SYS1-DBNDD2H3BUS1 97 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 GAGE7O76087 117 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 GAGE12FP0CL80 117 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 GAGE12GP0CL81 117 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 GAGE12IP0CL82 117 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 EMP1P54849 157 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 SAMD5Q5TGI4 173 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 KIR2DL4Q99706 377 aa15.43■□□□□ 0.06
USP6NL-204ENST00000606752 TRGV2A0A075B6R0 118 aa15.42■□□□□ 0.06
USP6NL-204ENST00000606752 NUDT3O95989 172 aa15.42■□□□□ 0.06
USP6NL-204ENST00000606752 NEGR1Q7Z3B1 354 aa15.42■□□□□ 0.06
USP6NL-204ENST00000606752 OR11H2Q8NH07 326 aa15.42■□□□□ 0.06
USP6NL-204ENST00000606752 CIDEAO60543 219 aa15.41■□□□□ 0.06
USP6NL-204ENST00000606752 P0DMU3 169 aa15.41■□□□□ 0.06
USP6NL-204ENST00000606752 FAM231AP0DMU4 169 aa15.41■□□□□ 0.06
USP6NL-204ENST00000606752 FAM231CP0DMU5 169 aa15.41■□□□□ 0.06
USP6NL-204ENST00000606752 PKD1L1Q8TDX9 2849 aa15.41■□□□□ 0.06
USP6NL-204ENST00000606752 RNF183Q96D59 192 aa15.4■□□□□ 0.06
USP6NL-204ENST00000606752 TNFRSF18Q9Y5U5 241 aa15.4■□□□□ 0.06
USP6NL-204ENST00000606752 CMYA5Q8N3K9 4069 aa15.4■□□□□ 0.06
USP6NL-204ENST00000606752 S100A12P80511 92 aa15.4■□□□□ 0.06
USP6NL-204ENST00000606752 PET117Q6UWS5 81 aa15.39■□□□□ 0.05
USP6NL-204ENST00000606752 IFI27L1Q96BM0 104 aa15.39■□□□□ 0.05
USP6NL-204ENST00000606752 DNAJC30Q96LL9 226 aa15.39■□□□□ 0.05
USP6NL-204ENST00000606752 SPATA12Q7Z6I5 190 aa15.38■□□□□ 0.05
USP6NL-204ENST00000606752 I3L3M4 83 aa15.38■□□□□ 0.05
USP6NL-204ENST00000606752 LINC00612Q8N6U2 182 aa15.38■□□□□ 0.05
USP6NL-204ENST00000606752 NEXN-AS1Q8NBZ9 246 aa15.38■□□□□ 0.05
USP6NL-204ENST00000606752 Q9UF83 564 aa15.38■□□□□ 0.05
USP6NL-204ENST00000606752 MIFP14174 115 aa15.37■□□□□ 0.05
USP6NL-204ENST00000606752 G0S2P27469 103 aa15.37■□□□□ 0.05
USP6NL-204ENST00000606752 TEX43Q6ZNM6 134 aa15.37■□□□□ 0.05
USP6NL-204ENST00000606752 C18orf15Q96N68 181 aa15.37■□□□□ 0.05
USP6NL-204ENST00000606752 TOMM6Q96B49 74 aa15.36■□□□□ 0.05
USP6NL-204ENST00000606752 C20orf202A1L168 122 aa15.36■□□□□ 0.05
USP6NL-204ENST00000606752 ATP5LO75964 103 aa15.36■□□□□ 0.05
USP6NL-204ENST00000606752 NBEAL2Q6ZNJ1 2754 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 IGHV4-28A0A0C4DH34 117 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 TRBV10-1A0A0K0K1A3 114 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 LYRM9A8MSI8 78 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 H0Y8G0 127 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 ANK2Q01484 3957 aa15.35■□□□□ 0.05
USP6NL-204ENST00000606752 K7EQD1 137 aa15.34■□□□□ 0.05
USP6NL-204ENST00000606752 DEFB130BP0DP73 79 aa15.34■□□□□ 0.05
USP6NL-204ENST00000606752 DEFB130AP0DP74 79 aa15.34■□□□□ 0.05
USP6NL-204ENST00000606752 C2orf66Q6UXQ4 117 aa15.34■□□□□ 0.05
USP6NL-204ENST00000606752 TSHBP01222 138 aa15.33■□□□□ 0.05
USP6NL-204ENST00000606752 RHOHQ15669 191 aa15.33■□□□□ 0.05
USP6NL-204ENST00000606752 SLC25A29Q8N8R3 303 aa15.33■□□□□ 0.05
USP6NL-204ENST00000606752 Q8NAQ8 132 aa15.33■□□□□ 0.05
USP6NL-204ENST00000606752 LINC01549A6NIU2 74 aa15.33■□□□□ 0.04
USP6NL-204ENST00000606752 FAM222AQ5U5X8 452 aa15.33■□□□□ 0.04
USP6NL-204ENST00000606752 LINC01545Q5VT33 79 aa15.33■□□□□ 0.04
USP6NL-204ENST00000606752 RIPPLY3P57055 190 aa15.32■□□□□ 0.04
USP6NL-204ENST00000606752 CYSLTR1Q9Y271 337 aa15.32■□□□□ 0.04
USP6NL-204ENST00000606752 TRGV4A0A0C4DH28 118 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 SCGB3A1Q96QR1 104 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 TP53TG1Q9Y2A0 90 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 TRBV7-3A0A075B6L6 115 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 TRBV6-4A0A1B0GX49 114 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 DEFB4AO15263 64 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 FHL2Q14192 279 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 ZNF664Q8N3J9 261 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 ZNRF2Q8NHG8 242 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 DKK2Q9UBU2 259 aa15.31■□□□□ 0.04
USP6NL-204ENST00000606752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.3■□□□□ 0.04
USP6NL-204ENST00000606752 PRSS1P07477 247 aa15.3■□□□□ 0.04
USP6NL-204ENST00000606752 RPL36AP83881 106 aaKnown RBP15.3■□□□□ 0.04
USP6NL-204ENST00000606752 LGALS9CQ6DKI2 356 aa15.3■□□□□ 0.04
USP6NL-204ENST00000606752 RPL36ALQ969Q0 106 aaKnown RBP15.3■□□□□ 0.04
USP6NL-204ENST00000606752 VAMP8Q9BV40 100 aa15.3■□□□□ 0.04
USP6NL-204ENST00000606752 PCP4L1A6NKN8 68 aa15.29■□□□□ 0.04
USP6NL-204ENST00000606752 ERASQ7Z444 233 aa15.29■□□□□ 0.04
USP6NL-204ENST00000606752 ATOH7Q8N100 152 aa15.29■□□□□ 0.04
USP6NL-204ENST00000606752 PKIAP61925 76 aa15.27■□□□□ 0.04
USP6NL-204ENST00000606752 PMCHL2Q9BQD1 86 aa15.27■□□□□ 0.04
USP6NL-204ENST00000606752 RPL39P62891 51 aaKnown RBP15.27■□□□□ 0.03
USP6NL-204ENST00000606752 Q6ZN92 141 aa15.27■□□□□ 0.03
USP6NL-204ENST00000606752 C20orf203Q8NBC4 194 aa15.27■□□□□ 0.03
USP6NL-204ENST00000606752 PHLDA1Q8WV24 401 aaPredicted RBP15.27■□□□□ 0.03
USP6NL-204ENST00000606752 PAM16Q9Y3D7 125 aa15.27■□□□□ 0.03
USP6NL-204ENST00000606752 PRADC1Q9BSG0 188 aa15.26■□□□□ 0.03
USP6NL-204ENST00000606752 ZMAT4Q9H898 229 aa15.26■□□□□ 0.03
USP6NL-204ENST00000606752 TRAV9-2A0A087WT02 112 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 IGHV3-38A0A0C4DH36 116 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 GAGE12JA6NER3 117 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms