RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 MYO7AQ13402 2215 aa4.13□□□□□ -1.75
LSM1P2-201ENST00000604911 IGLV3-9A0A075B6K5 115 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 A0A087WVE0 104 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 IGHV5-51A0A0C4DH38 117 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 IGKV3D-7A0A0C4DH55 119 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 C5orf67F2Z3F1 127 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 PPP1R17O96001 155 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 RPL27AP46776 148 aaKnown RBP4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 ZNF137PP52743 207 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 SPTSSBQ8NFR3 76 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 LINC01560Q8TB33 94 aa4.12□□□□□ -1.75
LSM1P2-201ENST00000604911 D6R8Y8 96 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 LEPROTO15243 131 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 RPL28P46779 137 aaKnown RBP4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 OBSCN-AS1Q96MR7 158 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 SCGB3A1Q96QR1 104 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 XAGE1AQ9HD64 81 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 TMEM14BQ9NUH8 114 aa4.11□□□□□ -1.75
LSM1P2-201ENST00000604911 IGLV3-12A0A075B6K2 115 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 CCL22O00626 93 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 ZNF32P17041 273 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 Q5VV11 94 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 HEATR1Q9H583 2144 aaKnown RBP4.1□□□□□ -1.75
LSM1P2-201ENST00000604911 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 GON4LQ3T8J9 2241 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 NDUFA3O95167 84 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 IGHV3-13P01766 116 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 BSPH1Q075Z2 132 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 C15orf32Q32M92 178 aa4.09□□□□□ -1.75
LSM1P2-201ENST00000604911 EML5Q05BV3 1969 aa4.09□□□□□ -1.76
LSM1P2-201ENST00000604911 NOTCH4Q99466 2003 aa4.09□□□□□ -1.76
LSM1P2-201ENST00000604911 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 IGHV3-16A0A0C4DH30 117 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 TRBV5-4A0A0C4DH59 114 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 SOCS3O14543 225 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 ATP6V0E1O15342 81 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 TRGV3P03979 118 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 CD24P25063 80 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 FXYD7P58549 80 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 MUSTN1Q8IVN3 82 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 Q8IYB0 196 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 KLF14Q8TD94 323 aaPredicted RBP4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 LINC00846Q9NV44 126 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 SNURFQ9Y675 71 aa4.08□□□□□ -1.76
LSM1P2-201ENST00000604911 TCF20Q9UGU0 1960 aaKnown RBP4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 IGKV1-12A0A0C4DH73 117 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 IGIPA6NJ69 53 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 H7C2G1 150 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 I3L3M4 83 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 M0R3E3 92 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 IGKV1D-12P01611 117 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 ARMS2P0C7Q2 107 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 P0C879 139 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 IGHV3-43DP0DP04 118 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 C17orf82Q86X59 251 aaPredicted RBP4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 UBL5Q9BZL1 73 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 TMEM14CQ9P0S9 112 aa4.07□□□□□ -1.76
LSM1P2-201ENST00000604911 UTRNP46939 3433 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 IGHV5-10-1A0A0J9YXX1 117 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 H3BSH0 61 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 PSCAO43653 123 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 RETNLBQ9BQ08 111 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 LINC00467Q9BRT7 94 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 LINC00574Q9H8X3 128 aa4.06□□□□□ -1.76
LSM1P2-201ENST00000604911 COL5A1P20908 1838 aaPredicted RBP4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 IGHV3OR16-12A0A075B7B8 117 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 IGKV6D-41A0A0C4DH26 115 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 K7EQG2 157 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 IGKV1-39P01597 117 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 IGKV1D-39P04432 117 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 DEFA4P12838 97 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 ZNF833PQ6ZTB9 187 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 KIF25-AS1Q9Y6Z4 181 aa4.05□□□□□ -1.76
LSM1P2-201ENST00000604911 TET1Q8NFU7 2136 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 MDC1Q14676 2089 aaKnown RBP4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 ARID1AO14497 2285 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 IGLV2-18A0A075B6J9 118 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 IGLV3-16A0A075B6K0 115 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 IGHV3-72A0A0B4J1Y9 119 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 SAA2P0DJI9 122 aaPredicted RBP4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 GNLYP22749 145 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 ELOF1P60002 83 aaKnown RBP4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 TMEM61Q8N0U2 210 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 FAM218AQ96MZ4 157 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 CCL28Q9NRJ3 127 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 CELA1Q9UNI1 258 aa4.04□□□□□ -1.76
LSM1P2-201ENST00000604911 MYOFQ9NZM1 2061 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms