RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TRGV3P03979 118 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 Q8N6K4 173 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 C14orf132Q9NPU4 83 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 UTRNP46939 3433 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 CCL4P13236 92 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 RPL39P5Q59GN2 51 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 LINC01560Q8TB33 94 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 CCL13Q99616 98 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 SEC16AO15027 2179 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 CACNA1DQ01668 2161 aa6.42□□□□□ -1.38
COMMD3-215ENST00000602574 A0A087WZ39 114 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 SEM1Q6ZVN7 128 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 IGHV3-43A0A0B4J1X8 118 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 IGHV3-43DP0DP04 118 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 TMEM254Q8TBM7 123 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 Q9H8V8 135 aa6.41□□□□□ -1.38
COMMD3-215ENST00000602574 F6UB75 175 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 PRYO14603 147 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 CXCL6P80162 114 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 CCL17Q92583 94 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 MRPL36Q9P0J6 103 aaKnown RBP6.4□□□□□ -1.38
COMMD3-215ENST00000602574 PCNTO95613 3336 aa6.4□□□□□ -1.38
COMMD3-215ENST00000602574 IGHV7-4-1A0A0J9YVY3 117 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 IGHV3-30-3P0DP02 117 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 Q6ZS52 159 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 TRAV22A0A0B4J277 110 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 LOC100131303A0A0U1RQF7 123 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 JMJD7-PLA2G4BH0Y9G9 81 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 Q6ZSV7 163 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 NKAPP1Q8N9T2 125 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 TMEM167AQ8TBQ9 72 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 ESM1Q9NQ30 184 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 PDE4DIPQ5VU43 2346 aa6.39□□□□□ -1.39
COMMD3-215ENST00000602574 DEFB108AA8MXU0 73 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 CTSGP08311 255 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 SMAD5-AS1Q9Y6J3 95 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 A0A096LPE4 126 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 IGHV1-18A0A0C4DH31 117 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 SAA1P0DJI8 122 aaPredicted RBP6.38□□□□□ -1.39
COMMD3-215ENST00000602574 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 NDUFA12Q9UI09 145 aa6.38□□□□□ -1.39
COMMD3-215ENST00000602574 IGHV4OR15-8A0A075B7B6 117 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 A0A087WW49 117 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 H0YGX0 51 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 CGB3P0DN86 165 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 CGB7P0DN87 165 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 WT1-ASQ06250 92 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 PIK3CD-AS1Q5SR53 167 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 ZNF503-AS2A6NEH8 195 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 SAA2P0DJI9 122 aaPredicted RBP6.37□□□□□ -1.39
COMMD3-215ENST00000602574 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
COMMD3-215ENST00000602574 LYZP61626 148 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 LPAL2Q16609 132 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
COMMD3-215ENST00000602574 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 SRRM5B3KS81 715 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 LINC01565O15544 149 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 SPANXN1Q5VSR9 72 aa6.36□□□□□ -1.39
COMMD3-215ENST00000602574 DSCAML1Q8TD84 2053 aa6.35□□□□□ -1.39
COMMD3-215ENST00000602574 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
COMMD3-215ENST00000602574 C16orf90A8MZG2 172 aa6.35□□□□□ -1.39
COMMD3-215ENST00000602574 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
COMMD3-215ENST00000602574 CCL24O00175 119 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 POLR2KP53803 58 aaKnown RBP6.34□□□□□ -1.39
COMMD3-215ENST00000602574 NREPQ16612 68 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 FREM1Q5H8C1 2179 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 TRAV10A0A0B4J240 114 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 NDUFA1O15239 70 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 IGHV3-9P01782 118 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 C1orf229Q6ZS94 237 aaPredicted RBP6.34□□□□□ -1.39
COMMD3-215ENST00000602574 GPHB5Q86YW7 130 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 KIF25-AS1Q9Y6Z4 181 aa6.34□□□□□ -1.39
COMMD3-215ENST00000602574 RTTNQ86VV8 2226 aa6.34□□□□□ -1.4
COMMD3-215ENST00000602574 IGKV2-40A0A087WW87 121 aaPredicted RBP6.33□□□□□ -1.4
COMMD3-215ENST00000602574 BUB1B-PAK6H3BSN5 160 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 IGKV2D-40P01614 121 aaPredicted RBP6.33□□□□□ -1.4
COMMD3-215ENST00000602574 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 CLEC19AQ6UXS0 136 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 WFDC9Q8NEX5 89 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 A0A0C4DFX4 3053 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 GNRH2O43555 120 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 Q5VV11 94 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 HCP5Q6MZN7 132 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 ARHGAP32A7KAX9 2087 aa6.33□□□□□ -1.4
COMMD3-215ENST00000602574 LY6G6EA0A0G2JKS1 128 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 C9orf129Q5T035 196 aaKnown RBP6.32□□□□□ -1.4
COMMD3-215ENST00000602574 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
COMMD3-215ENST00000602574 U3KQA8 63 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 DNAH12Q6ZR08 3092 aa6.32□□□□□ -1.4
COMMD3-215ENST00000602574 IGKV3-15P01624 115 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms