RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 C21orf62-AS1Q17RA5 79 aa14.42□□□□□ -0.1
GRAMD1A-207ENST00000598118 OPRPNQ99935 248 aaPredicted RBP14.42□□□□□ -0.1
GRAMD1A-207ENST00000598118 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
GRAMD1A-207ENST00000598118 LINC01549A6NIU2 74 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 P0DMU3 169 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 FAM231AP0DMU4 169 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 FAM231CP0DMU5 169 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 HTN1P15515 57 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 ZNRF2Q8NHG8 242 aa14.41□□□□□ -0.1
GRAMD1A-207ENST00000598118 RBMY1BA6NDE4 496 aaKnown RBP14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 RBMY1EA6NEQ0 496 aaKnown RBP14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 RBMY1DP0C7P1 496 aaKnown RBP14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 TRPT1Q86TN4 253 aaKnown RBP14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 Q8N2B8 174 aa14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 K7ERU9 68 aa14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 Q96MF0 132 aa14.4□□□□□ -0.1
GRAMD1A-207ENST00000598118 TRGV11A0A075B6L2 103 aa14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 SONP18583 2426 aaKnown RBP14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 SCGB2A2Q13296 93 aa14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 TMEM61Q8N0U2 210 aa14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 ZNF479Q96JC4 524 aa14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 VPS25Q9BRG1 176 aa14.39□□□□□ -0.11
GRAMD1A-207ENST00000598118 A0A1B0GWB2 263 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 H3BMM0 161 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 NSUN5P1Q3KNT7 163 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 IGHV3-73A0A0B4J1V6 119 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 PROK1P58294 105 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 TSPEAR-AS2P59090 65 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 PAPPA-AS1Q5QFB9 102 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 SCGB1D4Q6XE38 83 aa14.38□□□□□ -0.11
GRAMD1A-207ENST00000598118 KRTAP1-3Q8IUG1 177 aa14.37□□□□□ -0.11
GRAMD1A-207ENST00000598118 A8MTW9 85 aa14.36□□□□□ -0.11
GRAMD1A-207ENST00000598118 RHOHQ15669 191 aa14.36□□□□□ -0.11
GRAMD1A-207ENST00000598118 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
GRAMD1A-207ENST00000598118 APCP25054 2843 aa14.36□□□□□ -0.11
GRAMD1A-207ENST00000598118 DLX4Q92988 240 aaPredicted RBP14.36□□□□□ -0.11
GRAMD1A-207ENST00000598118 KHDC1LQ5JSQ8 128 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 C20orf203Q8NBC4 194 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 WNK1Q9H4A3 2382 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 I3L3M4 83 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 HERVK_113P61574 105 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 C4orf3Q8WVX3 66 aa14.35□□□□□ -0.11
GRAMD1A-207ENST00000598118 RRN3P1Q2M238 152 aa14.34□□□□□ -0.11
GRAMD1A-207ENST00000598118 LRRC75A-AS1Q8N1F1 130 aa14.34□□□□□ -0.11
GRAMD1A-207ENST00000598118 Q9UF83 564 aa14.34□□□□□ -0.11
GRAMD1A-207ENST00000598118 A0A0J9YY99 117 aa14.33□□□□□ -0.12
GRAMD1A-207ENST00000598118 SRSF9Q13242 221 aaKnown RBP eCLIP14.33□□□□□ -0.12
GRAMD1A-207ENST00000598118 EPG5Q9HCE0 2579 aa14.33□□□□□ -0.12
GRAMD1A-207ENST00000598118 ITPR3Q14573 2671 aa14.33□□□□□ -0.12
GRAMD1A-207ENST00000598118 G3V4G9 280 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 MAP6D1Q9H9H5 199 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 PEMTQ9UBM1 199 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 CUBNO60494 3623 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 NFE4Q86UQ8 179 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 AMELXQ99217 191 aa14.32□□□□□ -0.12
GRAMD1A-207ENST00000598118 CHD6Q8TD26 2715 aa14.31□□□□□ -0.12
GRAMD1A-207ENST00000598118 H3BMG7 143 aa14.31□□□□□ -0.12
GRAMD1A-207ENST00000598118 SPAG8Q99932 426 aaPredicted RBP14.31□□□□□ -0.12
GRAMD1A-207ENST00000598118 IGLV4-3A0A075B6K6 122 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 TRAV2A0A0B4J234 112 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 Q6ZSN1 163 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 UBE2D1P51668 147 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 DEFB114Q30KQ6 69 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 FAM104AQ969W3 186 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 EDA2RQ9HAV5 297 aa14.3□□□□□ -0.12
GRAMD1A-207ENST00000598118 J3QQQ9 107 aa14.29□□□□□ -0.12
GRAMD1A-207ENST00000598118 M0R2P5 195 aa14.29□□□□□ -0.12
GRAMD1A-207ENST00000598118 DYNLRB2Q8TF09 96 aa14.29□□□□□ -0.12
GRAMD1A-207ENST00000598118 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
GRAMD1A-207ENST00000598118 WFDC2Q14508 124 aa14.28□□□□□ -0.12
GRAMD1A-207ENST00000598118 Q6ZSV7 163 aa14.28□□□□□ -0.12
GRAMD1A-207ENST00000598118 NF1P21359 2839 aa14.28□□□□□ -0.12
GRAMD1A-207ENST00000598118 A0A0J9YXV3 536 aa14.27□□□□□ -0.12
GRAMD1A-207ENST00000598118 TMEM223A0PJW6 202 aa14.27□□□□□ -0.12
GRAMD1A-207ENST00000598118 ZNF22P17026 224 aaPredicted RBP14.27□□□□□ -0.12
GRAMD1A-207ENST00000598118 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.13
GRAMD1A-207ENST00000598118 RPL24P83731 157 aaKnown RBP14.27□□□□□ -0.13
GRAMD1A-207ENST00000598118 C11orf72Q8NBR9 251 aa14.27□□□□□ -0.13
GRAMD1A-207ENST00000598118 IGHV3-64A0A075B6Q5 118 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 CD28P10747 220 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 CEMP1Q6PRD7 247 aaPredicted RBP14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 SLC25A29Q8N8R3 303 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 CCDC168Q8NDH2 2452 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 TMEM238LA0A1B0GVL6 79 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 A6NJY4 79 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 A8MWV9 139 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 ZNF415Q09FC8 603 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 CFAP126Q5VTH2 177 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 MTURNQ8N3F0 131 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 LINC01587Q99440 93 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 VCX2Q9H322 139 aa14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 MRPL16Q9NX20 251 aaKnown RBP14.26□□□□□ -0.13
GRAMD1A-207ENST00000598118 RHODO00212 210 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 IGHV3-30P01768 117 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 IGHV3-30-5P0DP03 117 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 LGALS3P17931 250 aaKnown RBP14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 C11orf44Q8N8P7 122 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 WFDC11Q8NEX6 87 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 SPANXB1Q9NS25 103 aaPredicted RBP14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 F8W1H4 67 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms