RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 VPS13DQ5THJ4 4388 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 CIDEAO60543 219 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 CRYBA4P53673 196 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 CDPF1Q6NVV7 123 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 C18orf32Q8TCD1 76 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 TPPP3Q9BW30 176 aa13.49□□□□□ -0.25
PNKP-207ENST00000596014 LCE6AA0A183 80 aa13.48□□□□□ -0.25
PNKP-207ENST00000596014 H3BNG1 76 aa13.48□□□□□ -0.25
PNKP-207ENST00000596014 NXPH4O95158 308 aa13.48□□□□□ -0.25
PNKP-207ENST00000596014 NUDT3O95989 172 aa13.48□□□□□ -0.25
PNKP-207ENST00000596014 CTRLP40313 264 aa13.48□□□□□ -0.25
PNKP-207ENST00000596014 ALKBH7Q9BT30 221 aaPredicted RBP13.48□□□□□ -0.25
PNKP-207ENST00000596014 PAX4O43316 350 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 JOSD1Q15040 202 aaPredicted RBP13.47□□□□□ -0.25
PNKP-207ENST00000596014 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 SPANXN1Q5VSR9 72 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 LINC00476Q8WZB0 136 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 SAMD10Q9BYL1 202 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 IGHV3-73A0A0B4J1V6 119 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 SSTP61278 116 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
PNKP-207ENST00000596014 S100A12P80511 92 aa13.46□□□□□ -0.26
PNKP-207ENST00000596014 LYZL1Q6UWQ5 148 aa13.46□□□□□ -0.26
PNKP-207ENST00000596014 ZFP2Q6ZN57 461 aa13.46□□□□□ -0.26
PNKP-207ENST00000596014 LY6G6CO95867 125 aa13.45□□□□□ -0.26
PNKP-207ENST00000596014 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
PNKP-207ENST00000596014 UFSP1Q6NVU6 142 aa13.45□□□□□ -0.26
PNKP-207ENST00000596014 CRYGDP07320 174 aa13.44□□□□□ -0.26
PNKP-207ENST00000596014 A0A087WWL8 130 aa13.44□□□□□ -0.26
PNKP-207ENST00000596014 CACNG7P62955 275 aa13.44□□□□□ -0.26
PNKP-207ENST00000596014 P0DMU3 169 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 FAM74A4Q5TZK3 123 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 Q6ZSN1 163 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 SLC25A29Q8N8R3 303 aa13.43□□□□□ -0.26
PNKP-207ENST00000596014 A0A096LPF7 62 aa13.42□□□□□ -0.26
PNKP-207ENST00000596014 TRBV6-4A0A1B0GX49 114 aa13.42□□□□□ -0.26
PNKP-207ENST00000596014 RHODO00212 210 aa13.42□□□□□ -0.26
PNKP-207ENST00000596014 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
PNKP-207ENST00000596014 GYPEP15421 78 aa13.41□□□□□ -0.26
PNKP-207ENST00000596014 PMCHP20382 165 aa13.41□□□□□ -0.26
PNKP-207ENST00000596014 AMTP48728 403 aa13.41□□□□□ -0.26
PNKP-207ENST00000596014 ICOSQ9Y6W8 199 aa13.41□□□□□ -0.26
PNKP-207ENST00000596014 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
PNKP-207ENST00000596014 NTF3P20783 257 aa13.4□□□□□ -0.26
PNKP-207ENST00000596014 CNFNQ9BYD5 112 aa13.4□□□□□ -0.26
PNKP-207ENST00000596014 K7EQD1 137 aa13.4□□□□□ -0.26
PNKP-207ENST00000596014 MRPL23Q16540 153 aaKnown RBP13.4□□□□□ -0.26
PNKP-207ENST00000596014 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
PNKP-207ENST00000596014 C14orf178Q8N769 122 aaPredicted RBP13.4□□□□□ -0.26
PNKP-207ENST00000596014 HYDINQ4G0P3 5121 aa13.39□□□□□ -0.27
PNKP-207ENST00000596014 LOC100131303A0A0U1RQF7 123 aa13.39□□□□□ -0.27
PNKP-207ENST00000596014 RHOHQ15669 191 aa13.39□□□□□ -0.27
PNKP-207ENST00000596014 AP1S3Q96PC3 154 aa13.39□□□□□ -0.27
PNKP-207ENST00000596014 PRADC1Q9BSG0 188 aa13.39□□□□□ -0.27
PNKP-207ENST00000596014 KIF25-AS1Q9Y6Z4 181 aa13.38□□□□□ -0.27
PNKP-207ENST00000596014 RYR3Q15413 4870 aa13.38□□□□□ -0.27
PNKP-207ENST00000596014 RYR2Q92736 4967 aa13.38□□□□□ -0.27
PNKP-207ENST00000596014 CCL18P55774 89 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 TWIST1Q15672 202 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 UBE2DNLQ8IWF7 75 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 HSBP1O75506 76 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 SMIM17P0DL12 118 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 ESRGQ1W209 222 aa13.37□□□□□ -0.27
PNKP-207ENST00000596014 EVI2AP22794 236 aa13.36□□□□□ -0.27
PNKP-207ENST00000596014 LINC00315P59091 139 aa13.36□□□□□ -0.27
PNKP-207ENST00000596014 FAM104BQ5XKR9 115 aa13.36□□□□□ -0.27
PNKP-207ENST00000596014 NEGR1Q7Z3B1 354 aa13.36□□□□□ -0.27
PNKP-207ENST00000596014 Q9UF83 564 aa13.36□□□□□ -0.27
PNKP-207ENST00000596014 SCGB1D1O95968 90 aa13.35□□□□□ -0.27
PNKP-207ENST00000596014 NIT1Q86X76 327 aa13.35□□□□□ -0.27
PNKP-207ENST00000596014 AMN1Q8IY45 258 aa13.35□□□□□ -0.27
PNKP-207ENST00000596014 CHCHD1Q96BP2 118 aaKnown RBP13.35□□□□□ -0.27
PNKP-207ENST00000596014 LINC00588Q9Y4M8 146 aa13.35□□□□□ -0.27
PNKP-207ENST00000596014 ZNF56Q15929 161 aa13.34□□□□□ -0.27
PNKP-207ENST00000596014 FAM19A2Q8N3H0 131 aa13.34□□□□□ -0.27
PNKP-207ENST00000596014 DNAH6Q9C0G6 4158 aa13.34□□□□□ -0.27
PNKP-207ENST00000596014 F5H697 171 aa13.34□□□□□ -0.27
PNKP-207ENST00000596014 TMEM191AQ9H0A3 160 aa13.34□□□□□ -0.27
PNKP-207ENST00000596014 MRPL51Q4U2R6 128 aaKnown RBP13.33□□□□□ -0.28
PNKP-207ENST00000596014 LYPD5Q6UWN5 251 aa13.33□□□□□ -0.28
PNKP-207ENST00000596014 D6R8Y8 96 aa13.32□□□□□ -0.28
PNKP-207ENST00000596014 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
PNKP-207ENST00000596014 DPH3P1Q9H4G8 78 aa13.32□□□□□ -0.28
PNKP-207ENST00000596014 MGPP08493 103 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 KRTDAPP60985 99 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 ORMDL3Q8N138 153 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 TRBV10-1A0A0K0K1A3 114 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 GAGE12JA6NER3 117 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 PKIAP61925 76 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 GAGE1Q13065 139 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 GAGE4Q13068 117 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 GAGE5Q13069 117 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 GAGE13Q4V321 117 aa13.31□□□□□ -0.28
PNKP-207ENST00000596014 PRELID3AQ96N28 172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms