RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 EDA2RQ9HAV5 297 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 NPSP0C0P6 89 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 PROK1P58294 105 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 SEC11AP67812 179 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 HSD52Q0P140 79 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 PIK3CD-AS1Q5SR53 167 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 TP53TG1Q9Y2A0 90 aa14.4□□□□□ -0.1
CLIP3-206ENST00000593074 TAX1BP3O14907 124 aa14.39□□□□□ -0.11
CLIP3-206ENST00000593074 HTN1P15515 57 aa14.39□□□□□ -0.11
CLIP3-206ENST00000593074 PTH2Q96A98 100 aa14.39□□□□□ -0.11
CLIP3-206ENST00000593074 IGIPA6NJ69 53 aa14.38□□□□□ -0.11
CLIP3-206ENST00000593074 ZNF415Q09FC8 603 aa14.38□□□□□ -0.11
CLIP3-206ENST00000593074 HIGD1BQ9P298 99 aa14.38□□□□□ -0.11
CLIP3-206ENST00000593074 M0R2P5 195 aa14.38□□□□□ -0.11
CLIP3-206ENST00000593074 INSP01308 110 aa14.38□□□□□ -0.11
CLIP3-206ENST00000593074 PRSS29PA6NIE9 313 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 TSHBP01222 138 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 TTTY13Q9BZ97 58 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 NSUN5P1Q3KNT7 163 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 UFSP1Q6NVU6 142 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 TIMM17AQ99595 171 aa14.37□□□□□ -0.11
CLIP3-206ENST00000593074 RHOHQ15669 191 aa14.36□□□□□ -0.11
CLIP3-206ENST00000593074 C11orf72Q8NBR9 251 aa14.36□□□□□ -0.11
CLIP3-206ENST00000593074 TMEM141Q96I45 108 aa14.36□□□□□ -0.11
CLIP3-206ENST00000593074 A8MWV9 139 aa14.35□□□□□ -0.11
CLIP3-206ENST00000593074 PRM2P04554 102 aa14.35□□□□□ -0.11
CLIP3-206ENST00000593074 RPL39P62891 51 aaKnown RBP14.35□□□□□ -0.11
CLIP3-206ENST00000593074 NOTCH2Q04721 2471 aa14.35□□□□□ -0.11
CLIP3-206ENST00000593074 ADARB2-AS1A8MUL3 147 aa14.35□□□□□ -0.11
CLIP3-206ENST00000593074 LINC01587Q99440 93 aa14.35□□□□□ -0.11
CLIP3-206ENST00000593074 SAP30O75446 220 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 DEFB104AQ8WTQ1 72 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 TRBV25-1A0A075B6N4 114 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 OR11H12B2RN74 326 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 INAFM1C9JVW0 142 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 STHQ8IWL8 128 aa14.34□□□□□ -0.11
CLIP3-206ENST00000593074 I3L3M4 83 aa14.32□□□□□ -0.12
CLIP3-206ENST00000593074 SPXQ9BT56 116 aa14.32□□□□□ -0.12
CLIP3-206ENST00000593074 CHAC1Q9BUX1 264 aa14.32□□□□□ -0.12
CLIP3-206ENST00000593074 A6NDN8 102 aa14.32□□□□□ -0.12
CLIP3-206ENST00000593074 PMVKQ15126 192 aa14.32□□□□□ -0.12
CLIP3-206ENST00000593074 CMC4P56277 68 aaPredicted RBP14.31□□□□□ -0.12
CLIP3-206ENST00000593074 MAPKAPK5-AS1Q8N8E1 139 aa14.31□□□□□ -0.12
CLIP3-206ENST00000593074 IGLV4-69A0A075B6H9 119 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 TRAV8-6A0A0B4J262 113 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 CFAP126Q5VTH2 177 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 CST9LQ9H4G1 147 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 XCL2Q9UBD3 114 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 P0DMU3 169 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 FAM231AP0DMU4 169 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 FAM231CP0DMU5 169 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 UBE2V1Q13404 147 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 BEAN1Q3B7T3 259 aa14.3□□□□□ -0.12
CLIP3-206ENST00000593074 SETD2Q9BYW2 2564 aaPredicted RBP14.29□□□□□ -0.12
CLIP3-206ENST00000593074 WNK1Q9H4A3 2382 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 IGHV3-73A0A0B4J1V6 119 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 E9PLD3 99 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 NDUFA11Q86Y39 141 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 NACAE9PAV3 2078 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 IGLV1-51P01701 117 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 FOSL1P15407 271 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 KRTAP10-3P60369 221 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 PAPPA-AS1Q5QFB9 102 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 C20orf203Q8NBC4 194 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 OR11H2Q8NH07 326 aa14.29□□□□□ -0.12
CLIP3-206ENST00000593074 RHODO00212 210 aa14.28□□□□□ -0.12
CLIP3-206ENST00000593074 CCL25O15444 150 aa14.28□□□□□ -0.12
CLIP3-206ENST00000593074 C1orf158Q8N1D5 194 aa14.28□□□□□ -0.12
CLIP3-206ENST00000593074 C11orf86A6NJI1 115 aa14.27□□□□□ -0.12
CLIP3-206ENST00000593074 IL17DQ8TAD2 202 aa14.27□□□□□ -0.12
CLIP3-206ENST00000593074 H3BRM9 83 aa14.27□□□□□ -0.13
CLIP3-206ENST00000593074 PTTG1IPP53801 180 aa14.27□□□□□ -0.13
CLIP3-206ENST00000593074 FAM110AQ9BQ89 295 aa14.27□□□□□ -0.13
CLIP3-206ENST00000593074 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.13
CLIP3-206ENST00000593074 OTOGQ6ZRI0 2925 aa14.26□□□□□ -0.13
CLIP3-206ENST00000593074 VAMP3Q15836 100 aa14.26□□□□□ -0.13
CLIP3-206ENST00000593074 AZU1P20160 251 aa14.26□□□□□ -0.13
CLIP3-206ENST00000593074 Q6ZSN1 163 aa14.26□□□□□ -0.13
CLIP3-206ENST00000593074 PRADC1Q9BSG0 188 aa14.26□□□□□ -0.13
CLIP3-206ENST00000593074 MYMXA0A1B0GTQ4 84 aa14.25□□□□□ -0.13
CLIP3-206ENST00000593074 RS1O15537 224 aa14.25□□□□□ -0.13
CLIP3-206ENST00000593074 IGHV3-53P01767 116 aa14.24□□□□□ -0.13
CLIP3-206ENST00000593074 TNFRSF18Q9Y5U5 241 aa14.24□□□□□ -0.13
CLIP3-206ENST00000593074 GCSHP23434 173 aa14.24□□□□□ -0.13
CLIP3-206ENST00000593074 TAL2Q16559 108 aa14.24□□□□□ -0.13
CLIP3-206ENST00000593074 RNASE8Q8TDE3 154 aaKnown RBP14.24□□□□□ -0.13
CLIP3-206ENST00000593074 TM2D2Q9BX73 214 aa14.24□□□□□ -0.13
CLIP3-206ENST00000593074 PF4P02776 101 aa14.23□□□□□ -0.13
CLIP3-206ENST00000593074 FXYD2P54710 66 aa14.23□□□□□ -0.13
CLIP3-206ENST00000593074 CEND1Q8N111 149 aa14.23□□□□□ -0.13
CLIP3-206ENST00000593074 EMP1P54849 157 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 C19orf73Q9NVV2 129 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 C9orf118A6NHY6 69 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 NFE4Q86UQ8 179 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 Q9UF83 564 aa14.22□□□□□ -0.13
CLIP3-206ENST00000593074 IGHV3OR16-12A0A075B7B8 117 aa14.21□□□□□ -0.13
CLIP3-206ENST00000593074 HERVK_113P61574 105 aa14.21□□□□□ -0.13
CLIP3-206ENST00000593074 DNAJC30Q96LL9 226 aa14.21□□□□□ -0.13
CLIP3-206ENST00000593074 OPRPNQ99935 248 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms