RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 NXPH4O95158 308 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 PRM2P04554 102 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 CDKN1BP46527 198 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 SSTP61278 116 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
CIRBP-235ENST00000591935 J3KRW8 73 aa12.35□□□□□ -0.43
CIRBP-235ENST00000591935 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-235ENST00000591935 Q6ZQT7 251 aa12.35□□□□□ -0.43
CIRBP-235ENST00000591935 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
CIRBP-235ENST00000591935 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
CIRBP-235ENST00000591935 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
CIRBP-235ENST00000591935 NPYP01303 97 aa12.34□□□□□ -0.43
CIRBP-235ENST00000591935 IFI27P40305 119 aaPredicted RBP12.34□□□□□ -0.43
CIRBP-235ENST00000591935 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
CIRBP-235ENST00000591935 LINC00336Q6ZUF6 198 aa12.34□□□□□ -0.43
CIRBP-235ENST00000591935 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
CIRBP-235ENST00000591935 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
CIRBP-235ENST00000591935 RNASE3P12724 160 aaKnown RBP12.33□□□□□ -0.44
CIRBP-235ENST00000591935 DDTP30046 118 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 DAD1P61803 113 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 KIR3DS1Q14943 382 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 PET117Q6UWS5 81 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 VAMP8Q9BV40 100 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 PRO1933Q9H354 126 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
CIRBP-235ENST00000591935 C20orf202A1L168 122 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 LYRM9A8MSI8 78 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 GNRH2O43555 120 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 EVI2AP22794 236 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
CIRBP-235ENST00000591935 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 M0R381 172 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 PPP1R17O96001 155 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 HTN3P15516 51 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 Q8N8P6 123 aa12.31□□□□□ -0.44
CIRBP-235ENST00000591935 TRAV12-2A0A075B6T6 113 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 SMKR1H3BMG3 65 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 UBE2DNLQ8IWF7 75 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 AP1S3Q96PC3 154 aa12.3□□□□□ -0.44
CIRBP-235ENST00000591935 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 NCR2O95944 276 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 HBDP02042 147 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 AZU1P20160 251 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 NRACQ8N912 160 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 LINC01587Q99440 93 aa12.29□□□□□ -0.44
CIRBP-235ENST00000591935 IGHV3-16A0A0C4DH30 117 aa12.28□□□□□ -0.44
CIRBP-235ENST00000591935 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
CIRBP-235ENST00000591935 C15orf53Q8NAA6 179 aa12.28□□□□□ -0.44
CIRBP-235ENST00000591935 C20orf78Q9BR46 151 aa12.28□□□□□ -0.44
CIRBP-235ENST00000591935 LINC00467Q9BRT7 94 aa12.28□□□□□ -0.44
CIRBP-235ENST00000591935 TIMM8BQ9Y5J9 83 aaPredicted RBP12.28□□□□□ -0.44
CIRBP-235ENST00000591935 K7EMI3 77 aa12.27□□□□□ -0.45
CIRBP-235ENST00000591935 FCER1GP30273 86 aa12.27□□□□□ -0.45
CIRBP-235ENST00000591935 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
CIRBP-235ENST00000591935 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 DNAH2Q9P225 4427 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 IGLV2-18A0A075B6J9 118 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 A0A096LNJ9 63 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
CIRBP-235ENST00000591935 M0R2N4 97 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 SMIM17P0DL12 118 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
CIRBP-235ENST00000591935 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 PTH2Q96A98 100 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
CIRBP-235ENST00000591935 PIK3CD-AS1Q5SR53 167 aa12.24□□□□□ -0.45
CIRBP-235ENST00000591935 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
CIRBP-235ENST00000591935 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-235ENST00000591935 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
CIRBP-235ENST00000591935 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
CIRBP-235ENST00000591935 CBY3A6NI87 242 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 GAS8-AS1O95177 125 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 HTN1P15515 57 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
CIRBP-235ENST00000591935 CTAG1AP78358 180 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 SPATA45Q537H7 98 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 FAT2Q9NYQ8 4349 aa12.23□□□□□ -0.45
CIRBP-235ENST00000591935 HERC2O95714 4834 aa12.22□□□□□ -0.45
CIRBP-235ENST00000591935 ATP5G1P05496 136 aa12.22□□□□□ -0.45
CIRBP-235ENST00000591935 LINC00315P59091 139 aa12.22□□□□□ -0.45
CIRBP-235ENST00000591935 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
CIRBP-235ENST00000591935 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
CIRBP-235ENST00000591935 PRSS29PA6NIE9 313 aa12.21□□□□□ -0.45
CIRBP-235ENST00000591935 F5H768 121 aa12.21□□□□□ -0.45
CIRBP-235ENST00000591935 SUMO2P61956 95 aaKnown RBP12.21□□□□□ -0.45
CIRBP-235ENST00000591935 LAGE3Q14657 143 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms