RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SMIM27A0A1W2PRY6 76 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 TMEM218A2RU14 115 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 M0QY20 66 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 PPP1R2P9O14990 202 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 RIGQ13278 110 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 C1orf134Q5TEV5 83 aa14.55□□□□□ -0.08
ATG4D-212ENST00000590096 TRAV9-2A0A087WT02 112 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 LINC00862A6NCI5 91 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 F8W036 122 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 RASL11AQ6T310 242 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 DNAJC30Q96LL9 226 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 TNFRSF18Q9Y5U5 241 aa14.54□□□□□ -0.08
ATG4D-212ENST00000590096 DNAH2Q9P225 4427 aa14.53□□□□□ -0.08
ATG4D-212ENST00000590096 IGHV3-38A0A0C4DH36 116 aa14.53□□□□□ -0.08
ATG4D-212ENST00000590096 MT-ND4LP03901 98 aa14.52□□□□□ -0.09
ATG4D-212ENST00000590096 DNAH10OSP0CZ25 163 aa14.52□□□□□ -0.09
ATG4D-212ENST00000590096 ANAPC16Q96DE5 110 aa14.52□□□□□ -0.09
ATG4D-212ENST00000590096 KRTAP1-5Q9BYS1 174 aa14.52□□□□□ -0.09
ATG4D-212ENST00000590096 FRAS1Q86XX4 4008 aa14.51□□□□□ -0.09
ATG4D-212ENST00000590096 K7EP13 123 aa14.51□□□□□ -0.09
ATG4D-212ENST00000590096 C6orf223Q8N319 242 aa14.51□□□□□ -0.09
ATG4D-212ENST00000590096 TMEM191AQ9H0A3 160 aa14.51□□□□□ -0.09
ATG4D-212ENST00000590096 ADCYAP1P18509 176 aa14.5□□□□□ -0.09
ATG4D-212ENST00000590096 DAZ4Q86SG3 579 aaKnown RBP14.5□□□□□ -0.09
ATG4D-212ENST00000590096 SEC11CQ9BY50 192 aa14.5□□□□□ -0.09
ATG4D-212ENST00000590096 NIT2Q9NQR4 276 aa14.5□□□□□ -0.09
ATG4D-212ENST00000590096 DAZ3Q9NR90 486 aaKnown RBP14.5□□□□□ -0.09
ATG4D-212ENST00000590096 TRAV26-2A0A0B4J265 109 aa14.49□□□□□ -0.09
ATG4D-212ENST00000590096 LINC01556Q5JQF7 62 aa14.49□□□□□ -0.09
ATG4D-212ENST00000590096 LINC00336Q6ZUF6 198 aa14.49□□□□□ -0.09
ATG4D-212ENST00000590096 C10orf126Q8N4M7 172 aa14.49□□□□□ -0.09
ATG4D-212ENST00000590096 GATD1Q8NB37 220 aa14.49□□□□□ -0.09
ATG4D-212ENST00000590096 A0A1B0GW15 77 aa14.48□□□□□ -0.09
ATG4D-212ENST00000590096 RTL8CO15255 209 aa14.48□□□□□ -0.09
ATG4D-212ENST00000590096 BTF3P20290 206 aaKnown RBP14.48□□□□□ -0.09
ATG4D-212ENST00000590096 TMEM97Q5BJF2 176 aa14.48□□□□□ -0.09
ATG4D-212ENST00000590096 FRZBQ92765 325 aa14.48□□□□□ -0.09
ATG4D-212ENST00000590096 TRBV6-8A0A0A6YYG3 113 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 IGHV3-30P01768 117 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 IGHV3-33P01772 117 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 S100A8P05109 93 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 IGHV3-30-3P0DP02 117 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 IGHV3-30-5P0DP03 117 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 CAMPP49913 170 aa14.46□□□□□ -0.09
ATG4D-212ENST00000590096 MRPL54Q6P161 138 aaKnown RBP14.46□□□□□ -0.09
ATG4D-212ENST00000590096 KCNIP4Q6PIL6 250 aa14.45□□□□□ -0.1
ATG4D-212ENST00000590096 AMN1Q8IY45 258 aa14.45□□□□□ -0.1
ATG4D-212ENST00000590096 URGCP-MRPS24S4R325 110 aa14.45□□□□□ -0.1
ATG4D-212ENST00000590096 PRSS29PA6NIE9 313 aa14.44□□□□□ -0.1
ATG4D-212ENST00000590096 RAB4AP20338 218 aa14.44□□□□□ -0.1
ATG4D-212ENST00000590096 HBBP68871 147 aa14.44□□□□□ -0.1
ATG4D-212ENST00000590096 DNAH17Q9UFH2 4485 aa14.44□□□□□ -0.1
ATG4D-212ENST00000590096 ATP5L2Q7Z4Y8 100 aa14.43□□□□□ -0.1
ATG4D-212ENST00000590096 RPL39LQ96EH5 51 aaKnown RBP14.43□□□□□ -0.1
ATG4D-212ENST00000590096 MRAP2Q96G30 205 aa14.43□□□□□ -0.1
ATG4D-212ENST00000590096 RNF185Q96GF1 192 aa14.43□□□□□ -0.1
ATG4D-212ENST00000590096 TRBV25-1A0A075B6N4 114 aa14.42□□□□□ -0.1
ATG4D-212ENST00000590096 NFE4Q86UQ8 179 aa14.42□□□□□ -0.1
ATG4D-212ENST00000590096 NIT1Q86X76 327 aa14.42□□□□□ -0.1
ATG4D-212ENST00000590096 A0A087WX48 190 aa14.41□□□□□ -0.1
ATG4D-212ENST00000590096 CHCHD5Q9BSY4 110 aa14.41□□□□□ -0.1
ATG4D-212ENST00000590096 CTDSP1Q9GZU7 261 aa14.41□□□□□ -0.1
ATG4D-212ENST00000590096 A0A1B0GXF2 115 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 TMEM262E9PQX1 116 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 C10orf91Q5T1B1 145 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 FAM104BQ5XKR9 115 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 NTM-AS1Q6ZSK4 140 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 Q8N3U1 123 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 CHCHD7Q9BUK0 85 aa14.4□□□□□ -0.1
ATG4D-212ENST00000590096 CARHSP1Q9Y2V2 147 aaKnown RBP14.4□□□□□ -0.1
ATG4D-212ENST00000590096 IGHV1-24A0A0C4DH33 117 aa14.39□□□□□ -0.11
ATG4D-212ENST00000590096 IBA57-AS1B1ANH7 110 aa14.39□□□□□ -0.11
ATG4D-212ENST00000590096 PKIAP61925 76 aa14.39□□□□□ -0.11
ATG4D-212ENST00000590096 COTL1Q14019 142 aa14.39□□□□□ -0.11
ATG4D-212ENST00000590096 FAT2Q9NYQ8 4349 aa14.39□□□□□ -0.11
ATG4D-212ENST00000590096 SDHAF1A6NFY7 115 aa14.38□□□□□ -0.11
ATG4D-212ENST00000590096 IQCJQ1A5X6 159 aa14.38□□□□□ -0.11
ATG4D-212ENST00000590096 IMMP2LQ96T52 175 aa14.38□□□□□ -0.11
ATG4D-212ENST00000590096 ST20Q9HBF5 79 aa14.38□□□□□ -0.11
ATG4D-212ENST00000590096 TRBV6-5A0A0K0K1A5 114 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 GAS8-AS1O95177 125 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 NCR2O95944 276 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 PPP1R17O96001 155 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 LAGE3Q14657 143 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 MRPL51Q4U2R6 128 aaKnown RBP14.37□□□□□ -0.11
ATG4D-212ENST00000590096 BTF3L4Q96K17 158 aa14.37□□□□□ -0.11
ATG4D-212ENST00000590096 SMKR1H3BMG3 65 aa14.36□□□□□ -0.11
ATG4D-212ENST00000590096 ELOBQ15370 118 aa14.36□□□□□ -0.11
ATG4D-212ENST00000590096 RPS10P46783 165 aaKnown RBP14.35□□□□□ -0.11
ATG4D-212ENST00000590096 AMTP48728 403 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 TNP2Q05952 138 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 GAGE6Q13070 117 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 RHEBQ15382 184 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 NDUFA5Q16718 116 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 Q6ZRN7 208 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-212ENST00000590096 DEFB104AQ8WTQ1 72 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 TMEM243Q9BU79 118 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 Q9HAA7 133 aa14.35□□□□□ -0.11
ATG4D-212ENST00000590096 I3L3M4 83 aa14.34□□□□□ -0.11
ATG4D-212ENST00000590096 PMCHP20382 165 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms