RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 SUMO2P61956 95 aaKnown RBP15.82■□□□□ 0.12
ATG4D-209ENST00000588857 Q6ZSN1 163 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 FA2HQ7L5A8 372 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 ST20Q9HBF5 79 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 NIT2Q9NQR4 276 aa15.82■□□□□ 0.12
ATG4D-209ENST00000588857 PMCHP20382 165 aa15.81■□□□□ 0.12
ATG4D-209ENST00000588857 LINC00310P59036 64 aa15.81■□□□□ 0.12
ATG4D-209ENST00000588857 DAD1P61803 113 aa15.81■□□□□ 0.12
ATG4D-209ENST00000588857 PDZD11Q5EBL8 140 aa15.81■□□□□ 0.12
ATG4D-209ENST00000588857 CHCHD1Q96BP2 118 aaKnown RBP15.81■□□□□ 0.12
ATG4D-209ENST00000588857 NXT2Q9NPJ8 142 aaKnown RBP15.81■□□□□ 0.12
ATG4D-209ENST00000588857 TRGV4A0A0C4DH28 118 aa15.8■□□□□ 0.12
ATG4D-209ENST00000588857 PRSS47A8MTI9 375 aa15.8■□□□□ 0.12
ATG4D-209ENST00000588857 NUPR1O60356 82 aa15.8■□□□□ 0.12
ATG4D-209ENST00000588857 S100A2P29034 98 aa15.8■□□□□ 0.12
ATG4D-209ENST00000588857 C11orf68Q9H3H3 251 aaKnown RBP15.8■□□□□ 0.12
ATG4D-209ENST00000588857 HIST3H2BBQ8N257 126 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 CELA1Q9UNI1 258 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 TENM3Q9P273 2699 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 TRBV6-5A0A0K0K1A5 114 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 HSBP1O75506 76 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 ESDP10768 282 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 Q8N8P6 123 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 URB1-AS1Q96HZ7 61 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 ZMAT4Q9H898 229 aa15.79■□□□□ 0.12
ATG4D-209ENST00000588857 SMIM2Q9BVW6 85 aa15.78■□□□□ 0.12
ATG4D-209ENST00000588857 AP5S1Q9NUS5 200 aa15.78■□□□□ 0.12
ATG4D-209ENST00000588857 TNFRSF18Q9Y5U5 241 aa15.78■□□□□ 0.12
ATG4D-209ENST00000588857 P0DMU3 169 aa15.77■□□□□ 0.11
ATG4D-209ENST00000588857 FAM231AP0DMU4 169 aa15.77■□□□□ 0.11
ATG4D-209ENST00000588857 FAM231CP0DMU5 169 aa15.77■□□□□ 0.11
ATG4D-209ENST00000588857 K7EQD1 137 aa15.76■□□□□ 0.11
ATG4D-209ENST00000588857 FHL2Q14192 279 aa15.76■□□□□ 0.11
ATG4D-209ENST00000588857 B9D2Q9BPU9 175 aa15.76■□□□□ 0.11
ATG4D-209ENST00000588857 DNAH9Q9NYC9 4486 aa15.76■□□□□ 0.11
ATG4D-209ENST00000588857 SDHAF1A6NFY7 115 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 RPL32P62910 135 aaKnown RBP15.75■□□□□ 0.11
ATG4D-209ENST00000588857 SLC25A29Q8N8R3 303 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 DNAJC30Q96LL9 226 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 TMEM70Q9BUB7 260 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 IGLV2-18A0A075B6J9 118 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 A0A0J9YWU9 116 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 TRBV10-1A0A0K0K1A3 114 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 TRBV6-4A0A1B0GX49 114 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 VCYO14598 125 aa15.75■□□□□ 0.11
ATG4D-209ENST00000588857 ATP5G1P05496 136 aa15.74■□□□□ 0.11
ATG4D-209ENST00000588857 POLR2KP53803 58 aaKnown RBP15.74■□□□□ 0.11
ATG4D-209ENST00000588857 NEXN-AS1Q8NBZ9 246 aa15.74■□□□□ 0.11
ATG4D-209ENST00000588857 TMEM18Q96B42 140 aa15.74■□□□□ 0.11
ATG4D-209ENST00000588857 AMTP48728 403 aa15.73■□□□□ 0.11
ATG4D-209ENST00000588857 FAM19A2Q8N3H0 131 aa15.73■□□□□ 0.11
ATG4D-209ENST00000588857 HHLA3Q9XRX5 114 aa15.73■□□□□ 0.11
ATG4D-209ENST00000588857 LOC105371267A0A1B0GV96 52 aa15.72■□□□□ 0.11
ATG4D-209ENST00000588857 RHOHQ15669 191 aa15.72■□□□□ 0.11
ATG4D-209ENST00000588857 PRADC1Q9BSG0 188 aa15.72■□□□□ 0.11
ATG4D-209ENST00000588857 Q9UF83 564 aa15.72■□□□□ 0.11
ATG4D-209ENST00000588857 TRBV27A0A0K0K1C4 114 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 LINC01546A6NGU7 62 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 IFITM10A6NMD0 228 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 FABP4P15090 132 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 RPL36AP83881 106 aaKnown RBP15.71■□□□□ 0.11
ATG4D-209ENST00000588857 NEGR1Q7Z3B1 354 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 RPL36ALQ969Q0 106 aaKnown RBP15.71■□□□□ 0.11
ATG4D-209ENST00000588857 KIR2DL4Q99706 377 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 HIST1H2BLQ99880 126 aa15.71■□□□□ 0.11
ATG4D-209ENST00000588857 IGHV1-24A0A0C4DH33 117 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 K7EMI3 77 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 TCAPO15273 167 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 LAGE3Q14657 143 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 PMCHL1Q16048 86 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 TRBV7-3A0A075B6L6 115 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 C12orf74Q32Q52 190 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 ZNRF2Q8NHG8 242 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 PRO0255Q9UI72 69 aa15.7■□□□□ 0.1
ATG4D-209ENST00000588857 I3L3M4 83 aa15.69■□□□□ 0.1
ATG4D-209ENST00000588857 ORMDL2Q53FV1 153 aa15.68■□□□□ 0.1
ATG4D-209ENST00000588857 C11orf45Q8TAV5 145 aa15.68■□□□□ 0.1
ATG4D-209ENST00000588857 PACRGQ96M98 296 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-209ENST00000588857 F5H768 121 aa15.67■□□□□ 0.1
ATG4D-209ENST00000588857 HTN3P15516 51 aa15.67■□□□□ 0.1
ATG4D-209ENST00000588857 FCER1GP30273 86 aa15.67■□□□□ 0.1
ATG4D-209ENST00000588857 CRYBA4P53673 196 aa15.67■□□□□ 0.1
ATG4D-209ENST00000588857 GAGE12JA6NER3 117 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 NHLRC4P0CG21 123 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-209ENST00000588857 GAGE1Q13065 139 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 GAGE4Q13068 117 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 GAGE5Q13069 117 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 GAGE13Q4V321 117 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 NUDT3O95989 172 aa15.66■□□□□ 0.1
ATG4D-209ENST00000588857 LOC100131303A0A0U1RQF7 123 aa15.65■□□□□ 0.1
ATG4D-209ENST00000588857 PAX4O43316 350 aa15.65■□□□□ 0.1
ATG4D-209ENST00000588857 HBDP02042 147 aa15.65■□□□□ 0.1
ATG4D-209ENST00000588857 AKR1D1P51857 326 aa15.65■□□□□ 0.1
ATG4D-209ENST00000588857 DEFB104AQ8WTQ1 72 aa15.65■□□□□ 0.1
ATG4D-209ENST00000588857 PHLDA1Q8WV24 401 aaPredicted RBP15.64■□□□□ 0.09
ATG4D-209ENST00000588857 COL7A1Q02388 2944 aa15.64■□□□□ 0.09
ATG4D-209ENST00000588857 TSHBP01222 138 aa15.63■□□□□ 0.09
ATG4D-209ENST00000588857 UBE2D3P61077 147 aa15.63■□□□□ 0.09
ATG4D-209ENST00000588857 UBE2D2P62837 147 aa15.63■□□□□ 0.09
ATG4D-209ENST00000588857 DAZ4Q86SG3 579 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms