RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 GAGE13Q4V321 117 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
CIRBP-218ENST00000588344 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 NIT2Q9NQR4 276 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
CIRBP-218ENST00000588344 TENM2Q9NT68 2774 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 MUC4Q99102 2169 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 K7EP13 123 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 RAB4AP20338 218 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 UBE2D3P61077 147 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 UBE2D2P62837 147 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 SLC7A5P1Q8MH63 180 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 ZNRF2Q8NHG8 242 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
CIRBP-218ENST00000588344 MRPS16Q9Y3D3 137 aaKnown RBP6.27□□□□□ -1.41
CIRBP-218ENST00000588344 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 PPBPP02775 128 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 CAMPP49913 170 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 COX19Q49B96 90 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 LELP1Q5T871 98 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 FAM104BQ5XKR9 115 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 MRPL54Q6P161 138 aaKnown RBP6.26□□□□□ -1.41
CIRBP-218ENST00000588344 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 LINC00588Q9Y4M8 146 aa6.26□□□□□ -1.41
CIRBP-218ENST00000588344 TRAV9-2A0A087WT02 112 aa6.25□□□□□ -1.41
CIRBP-218ENST00000588344 TRBV6-5A0A0K0K1A5 114 aa6.25□□□□□ -1.41
CIRBP-218ENST00000588344 AMN1Q8IY45 258 aa6.25□□□□□ -1.41
CIRBP-218ENST00000588344 Q9H8V8 135 aa6.25□□□□□ -1.41
CIRBP-218ENST00000588344 LYSTQ99698 3801 aa6.25□□□□□ -1.41
CIRBP-218ENST00000588344 SIVA1O15304 175 aa6.24□□□□□ -1.41
CIRBP-218ENST00000588344 BTF3P20290 206 aaKnown RBP6.24□□□□□ -1.41
CIRBP-218ENST00000588344 PKIAP61925 76 aa6.24□□□□□ -1.41
CIRBP-218ENST00000588344 TTC32Q5I0X7 151 aa6.24□□□□□ -1.41
CIRBP-218ENST00000588344 RNF185Q96GF1 192 aa6.24□□□□□ -1.41
CIRBP-218ENST00000588344 Q9UF83 564 aa6.24□□□□□ -1.41
CIRBP-218ENST00000588344 TRBV24-1A0A075B6N3 115 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 PHOX2AO14813 284 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 CKS2P33552 79 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 C20orf78Q9BR46 151 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 ST20Q9HBF5 79 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
CIRBP-218ENST00000588344 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
CIRBP-218ENST00000588344 TRBV6-8A0A0A6YYG3 113 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 I3L3M4 83 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 VCYO14598 125 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 TCAPO15273 167 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 NCR2O95944 276 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 MT-ND6P03923 174 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 COTL1Q14019 142 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
CIRBP-218ENST00000588344 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 C10orf126Q8N4M7 172 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 CHCHD7Q9BUK0 85 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 SMCO4Q9NRQ5 59 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
CIRBP-218ENST00000588344 TRBV25-1A0A075B6N4 114 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 HLA-DQA1P01909 254 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 DNAH10OSP0CZ25 163 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 PMCHP20382 165 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 RPL32P62910 135 aaKnown RBP6.21□□□□□ -1.42
CIRBP-218ENST00000588344 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 LINC01556Q5JQF7 62 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.42
CIRBP-218ENST00000588344 A0A087WX48 190 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 IGHV1-24A0A0C4DH33 117 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 TRBV27A0A0K0K1C4 114 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 NBDYA0A0U1RRE5 68 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 APCSP02743 223 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
CIRBP-218ENST00000588344 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
CIRBP-218ENST00000588344 ELOBQ15370 118 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
CIRBP-218ENST00000588344 KIR2DL4Q99706 377 aa6.2□□□□□ -1.42
CIRBP-218ENST00000588344 ALMS1Q8TCU4 4167 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 PRSS47A8MTI9 375 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 D6R8Y8 96 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 TMEM262E9PQX1 116 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 H7C423 109 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 TNFRSF6BO95407 300 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 Q6ZR54 194 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 NRACQ8N912 160 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 PRELID3AQ96N28 172 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 TMEM70Q9BUB7 260 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 VPS13DQ5THJ4 4388 aa6.19□□□□□ -1.42
CIRBP-218ENST00000588344 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
CIRBP-218ENST00000588344 IGLV2-18A0A075B6J9 118 aa6.18□□□□□ -1.42
CIRBP-218ENST00000588344 RPS10P46783 165 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms