RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 F6UB75 175 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 MIFP14174 115 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 C10orf128Q5T292 105 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 ZNF575Q86XF7 245 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 KLF14Q8TD94 323 aaPredicted RBP4.07□□□□□ -1.76
LINC01538-201ENST00000588074 CEP192Q8TEP8 1941 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV3-38A0A0C4DH36 116 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 IGIPA6NJ69 53 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 LEPROTO15243 131 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 BAALC-AS2P0C853 105 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 RPL28P46779 137 aaKnown RBP4.07□□□□□ -1.76
LINC01538-201ENST00000588074 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 C5orf42Q9H799 3197 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 CABIN1Q9Y6J0 2220 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV1-69DA0A0B4J2H0 117 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 K7EQG2 157 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV4-34P06331 123 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 OPRPNQ99935 248 aaPredicted RBP4.06□□□□□ -1.76
LINC01538-201ENST00000588074 CHD9Q3L8U1 2897 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 POLEQ07864 2286 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 REV3LO60673 3130 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV5-51A0A0C4DH38 117 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 K7EQD1 137 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 NNATQ16517 81 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 PATE2Q6UY27 113 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 TMEM14BQ9NUH8 114 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 PDE4DIPQ5VU43 2346 aa4.06□□□□□ -1.76
LINC01538-201ENST00000588074 IGLV4-69A0A075B6H9 119 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 TRAV23DV6A0A075B6W5 121 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 A8MUN3 132 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 SH2D1AO60880 128 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 CD70P32970 193 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 ZNF80P51504 273 aaPredicted RBP4.05□□□□□ -1.76
LINC01538-201ENST00000588074 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 TMEM61Q8N0U2 210 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 RMI2Q96E14 147 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 COX14Q96I36 57 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 LINC00846Q9NV44 126 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 TMEM14CQ9P0S9 112 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 TRIOBPQ9H2D6 2365 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 M0R1W7 72 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 CD28P10747 220 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 RNASE4P34096 147 aaKnown RBP4.05□□□□□ -1.76
LINC01538-201ENST00000588074 CRIP1P50238 77 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 LYPD1Q8N2G4 141 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 OBSCN-AS1Q96MR7 158 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 SMIM2Q9BVW6 85 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 MUC3AQ02505 3323 aa4.05□□□□□ -1.76
LINC01538-201ENST00000588074 FUSP35637 526 aaKnown RBP eCLIP4.04□□□□□ -1.76
LINC01538-201ENST00000588074 PRCDQ00LT1 54 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 C22orf24Q9Y442 160 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 MYO7BQ6PIF6 2116 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 CLPSP04118 112 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 LMO4P61968 165 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 CCL17Q92583 94 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 DIRC1Q969H9 104 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 TMEM141Q96I45 108 aa4.04□□□□□ -1.76
LINC01538-201ENST00000588074 NTN3O00634 580 aaPredicted RBP4.03□□□□□ -1.76
LINC01538-201ENST00000588074 LINC01565O15544 149 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 UBE2AP49459 152 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 MIAQ16674 131 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 FAM27BQ5VT28 67 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 C17orf82Q86X59 251 aaPredicted RBP4.03□□□□□ -1.76
LINC01538-201ENST00000588074 PRO3102Q9H379 93 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV1-45A0A0A0MS14 117 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 A0A0J9YXY3 114 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 M0R381 172 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 TMEM30BQ3MIR4 351 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 IGFL3Q6UXB1 125 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 C2orf66Q6UXQ4 117 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 DEFB123Q8N688 67 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 SNURFQ9Y675 71 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 A0A0C4DFX4 3053 aa4.03□□□□□ -1.76
LINC01538-201ENST00000588074 IGHV5-10-1A0A0J9YXX1 117 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 A6NN06 94 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 SOCS3O14543 225 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 GAS8-AS1O95177 125 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 CXCL6P80162 114 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 NKAPP1Q8N9T2 125 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 ALPK2Q86TB3 2170 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 TRBV7-4A0A0J9YYF1 115 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 DNAJC9-AS1A6NH13 148 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 LITAFQ99732 161 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 CACNA1IQ9P0X4 2223 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 ABCA7Q8IZY2 2146 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 LRRK1Q38SD2 2015 aa4.02□□□□□ -1.77
LINC01538-201ENST00000588074 MUC22E2RYF6 1773 aaPredicted RBP4.01□□□□□ -1.77
LINC01538-201ENST00000588074 IGHV3OR16-12A0A075B7B8 117 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 FAM19A3Q7Z5A8 133 aa4.01□□□□□ -1.77
LINC01538-201ENST00000588074 CCL13Q99616 98 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms