RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 LRP1Q07954 4544 aaKnown RBP9.79□□□□□ -0.84
HDAC5-206ENST00000587776 A0A1B0GV50 99 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 PFDN1O60925 122 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 LTAP01374 205 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 AKR1C3P42330 323 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
HDAC5-206ENST00000587776 CST9LP1Q5W188 147 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 CLPSL2Q6UWE3 100 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
HDAC5-206ENST00000587776 F5H697 171 aa9.78□□□□□ -0.84
HDAC5-206ENST00000587776 PRSS1P07477 247 aa9.78□□□□□ -0.84
HDAC5-206ENST00000587776 HNRNPA3P51991 378 aaKnown RBP9.78□□□□□ -0.84
HDAC5-206ENST00000587776 CCL20P78556 96 aa9.78□□□□□ -0.84
HDAC5-206ENST00000587776 DGAT2L7PQ6IED9 249 aa9.78□□□□□ -0.84
HDAC5-206ENST00000587776 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
HDAC5-206ENST00000587776 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
HDAC5-206ENST00000587776 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
HDAC5-206ENST00000587776 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
HDAC5-206ENST00000587776 SPANXN1Q5VSR9 72 aa9.76□□□□□ -0.85
HDAC5-206ENST00000587776 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
HDAC5-206ENST00000587776 OR10AG1Q8NH19 301 aa9.76□□□□□ -0.85
HDAC5-206ENST00000587776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.76□□□□□ -0.85
HDAC5-206ENST00000587776 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 MUC21A0A0G2JKD1 596 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 MUC21A0A140T8X8 626 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 SMIM17P0DL12 118 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 SSTP61278 116 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
HDAC5-206ENST00000587776 GAGE6Q13070 117 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 PRR27Q6MZM9 219 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 MLST8Q9BVC4 326 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 HMCN2Q8NDA2 5059 aa9.75□□□□□ -0.85
HDAC5-206ENST00000587776 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
HDAC5-206ENST00000587776 SULT1A2P50226 295 aa9.74□□□□□ -0.85
HDAC5-206ENST00000587776 RBX1P62877 108 aa9.74□□□□□ -0.85
HDAC5-206ENST00000587776 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
HDAC5-206ENST00000587776 RAB5CP51148 216 aa9.73□□□□□ -0.85
HDAC5-206ENST00000587776 C9orf62Q8N4C0 152 aa9.73□□□□□ -0.85
HDAC5-206ENST00000587776 DPH3Q96FX2 82 aa9.73□□□□□ -0.85
HDAC5-206ENST00000587776 PRR34Q9NV39 138 aa9.73□□□□□ -0.85
HDAC5-206ENST00000587776 FAT3Q8TDW7 4589 aa9.73□□□□□ -0.85
HDAC5-206ENST00000587776 hCG_2014768A0A024R1R8 64 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 hDV102S1A0JD36 115 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 PANO1I0J062 215 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 S100A9P06702 114 aaKnown RBP9.72□□□□□ -0.85
HDAC5-206ENST00000587776 CXCL1P09341 107 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 C11orf52Q96A22 123 aa9.72□□□□□ -0.85
HDAC5-206ENST00000587776 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.85
HDAC5-206ENST00000587776 SNAI2O43623 268 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 EIF5AL1Q6IS14 154 aaKnown RBP9.71□□□□□ -0.86
HDAC5-206ENST00000587776 AKAP14Q86UN6 197 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 VAX2Q9UIW0 290 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.86
HDAC5-206ENST00000587776 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 MGPP08493 103 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 RPL35P42766 123 aaKnown RBP9.7□□□□□ -0.86
HDAC5-206ENST00000587776 REG3AQ06141 175 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 Q6ZRU5 148 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 BAGE2Q86Y30 109 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 AP5S1Q9NUS5 200 aa9.7□□□□□ -0.86
HDAC5-206ENST00000587776 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
HDAC5-206ENST00000587776 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
HDAC5-206ENST00000587776 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
HDAC5-206ENST00000587776 MT1HL1P0DM35 61 aa9.68□□□□□ -0.86
HDAC5-206ENST00000587776 CNBPP62633 177 aaKnown RBP9.68□□□□□ -0.86
HDAC5-206ENST00000587776 IQCJQ1A5X6 159 aa9.68□□□□□ -0.86
HDAC5-206ENST00000587776 TPPP3Q9BW30 176 aa9.68□□□□□ -0.86
HDAC5-206ENST00000587776 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
HDAC5-206ENST00000587776 DPH3P1Q9H4G8 78 aa9.68□□□□□ -0.86
HDAC5-206ENST00000587776 A0A1B0GVG6 124 aa9.67□□□□□ -0.86
HDAC5-206ENST00000587776 H7C1H1 209 aa9.67□□□□□ -0.86
HDAC5-206ENST00000587776 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 P01737 135 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
HDAC5-206ENST00000587776 CIRBPQ14011 172 aaKnown RBP9.66□□□□□ -0.86
HDAC5-206ENST00000587776 CENPWQ5EE01 88 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
HDAC5-206ENST00000587776 TRBV20OR9-2A0A075B6H5 130 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 RAB19A4D1S5 217 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 TEX46H3BTG2 121 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 CHTF8P0CG12 524 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 BCL2P10415 239 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 WDR73Q6P4I2 378 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.86
HDAC5-206ENST00000587776 A0A087WYN8 130 aa9.64□□□□□ -0.87
HDAC5-206ENST00000587776 UBE2L6O14933 153 aa9.64□□□□□ -0.87
HDAC5-206ENST00000587776 NKX2-5P52952 324 aaPredicted RBP9.64□□□□□ -0.87
HDAC5-206ENST00000587776 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms