RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 DEFB4AO15263 64 aa2.56□□□□□ -2
VMP1-205ENST00000587470 CXorf1O96002 111 aa2.56□□□□□ -2
VMP1-205ENST00000587470 SLC25A5P05141 298 aaKnown RBP2.56□□□□□ -2
VMP1-205ENST00000587470 CHTF8P0CG12 524 aa2.56□□□□□ -2
VMP1-205ENST00000587470 TPT1P13693 172 aaKnown RBP2.56□□□□□ -2
VMP1-205ENST00000587470 MIFP14174 115 aa2.56□□□□□ -2
VMP1-205ENST00000587470 ZNF138P52744 262 aa2.56□□□□□ -2
VMP1-205ENST00000587470 FGF8P55075 233 aaPredicted RBP2.56□□□□□ -2
VMP1-205ENST00000587470 GNG5P63218 68 aa2.56□□□□□ -2
VMP1-205ENST00000587470 EIF5AP63241 154 aaKnown RBP2.56□□□□□ -2
VMP1-205ENST00000587470 KIAA0087Q14695 138 aa2.56□□□□□ -2
VMP1-205ENST00000587470 C12orf74Q32Q52 190 aa2.56□□□□□ -2
VMP1-205ENST00000587470 AKR1C8PQ5T2L2 129 aa2.56□□□□□ -2
VMP1-205ENST00000587470 PRR9Q5T870 116 aa2.56□□□□□ -2
VMP1-205ENST00000587470 LGALS9CQ6DKI2 356 aa2.56□□□□□ -2
VMP1-205ENST00000587470 C5orf17Q8NAS9 161 aa2.56□□□□□ -2
VMP1-205ENST00000587470 OR10J6PQ8NGY7 276 aa2.56□□□□□ -2
VMP1-205ENST00000587470 FAM213BQ8TBF2 198 aa2.56□□□□□ -2
VMP1-205ENST00000587470 RXFP4Q8TDU9 374 aa2.56□□□□□ -2
VMP1-205ENST00000587470 SFT2D1Q8WV19 159 aa2.56□□□□□ -2
VMP1-205ENST00000587470 C11orf68Q9H3H3 251 aaKnown RBP2.56□□□□□ -2
VMP1-205ENST00000587470 TMEM167BQ9NRX6 74 aa2.56□□□□□ -2
VMP1-205ENST00000587470 EPDR1Q9UM22 224 aa2.56□□□□□ -2
VMP1-205ENST00000587470 KLF12Q9Y4X4 402 aa2.56□□□□□ -2
VMP1-205ENST00000587470 LENEPQ9Y5L5 61 aa2.56□□□□□ -2
VMP1-205ENST00000587470 TRAV12-3A0A0B4J271 114 aa2.55□□□□□ -2
VMP1-205ENST00000587470 A0A0J9YXY3 114 aa2.55□□□□□ -2
VMP1-205ENST00000587470 MAP1LC3B2A6NCE7 125 aa2.55□□□□□ -2
VMP1-205ENST00000587470 NUPR2A6NF83 97 aa2.55□□□□□ -2
VMP1-205ENST00000587470 SMKR1H3BMG3 65 aa2.55□□□□□ -2
VMP1-205ENST00000587470 H7BYZ3 331 aa2.55□□□□□ -2
VMP1-205ENST00000587470 PFDN1O60925 122 aa2.55□□□□□ -2
VMP1-205ENST00000587470 OXTP01178 125 aa2.55□□□□□ -2
VMP1-205ENST00000587470 TCRAP04437 139 aa2.55□□□□□ -2
VMP1-205ENST00000587470 TSPOP30536 169 aa2.55□□□□□ -2
VMP1-205ENST00000587470 CSN1S1P47710 185 aa2.55□□□□□ -2
VMP1-205ENST00000587470 ATP5G3P48201 142 aa2.55□□□□□ -2
VMP1-205ENST00000587470 CRIP1P50238 77 aa2.55□□□□□ -2
VMP1-205ENST00000587470 RAB5CP51148 216 aa2.55□□□□□ -2
VMP1-205ENST00000587470 TAS2R60P59551 318 aa2.55□□□□□ -2
VMP1-205ENST00000587470 BTN1A1Q13410 526 aa2.55□□□□□ -2
VMP1-205ENST00000587470 FAM74A1Q5RGS3 127 aa2.55□□□□□ -2
VMP1-205ENST00000587470 DPPA3Q6W0C5 159 aa2.55□□□□□ -2
VMP1-205ENST00000587470 GOLT1AQ6ZVE7 132 aa2.55□□□□□ -2
VMP1-205ENST00000587470 Q8TAT8 98 aa2.55□□□□□ -2
VMP1-205ENST00000587470 C20orf144Q9BQM9 153 aa2.55□□□□□ -2
VMP1-205ENST00000587470 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
VMP1-205ENST00000587470 MAP1LC3BQ9GZQ8 125 aa2.55□□□□□ -2
VMP1-205ENST00000587470 DMBT1Q9UGM3 2413 aaPredicted RBP2.55□□□□□ -2
VMP1-205ENST00000587470 KLK12Q9UKR0 248 aa2.55□□□□□ -2
VMP1-205ENST00000587470 ARL2-SNX15V9GYD0 113 aa2.55□□□□□ -2
VMP1-205ENST00000587470 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
VMP1-205ENST00000587470 TRBV6-1A0A0K0K1D8 114 aa2.54□□□□□ -2
VMP1-205ENST00000587470 C7orf71A4D174 169 aa2.54□□□□□ -2
VMP1-205ENST00000587470 PEX7O00628 323 aa2.54□□□□□ -2
VMP1-205ENST00000587470 INSP01308 110 aa2.54□□□□□ -2
VMP1-205ENST00000587470 HBE1P02100 147 aa2.54□□□□□ -2
VMP1-205ENST00000587470 GPX1P07203 203 aa2.54□□□□□ -2
VMP1-205ENST00000587470 RNASE4P34096 147 aaKnown RBP2.54□□□□□ -2
VMP1-205ENST00000587470 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
VMP1-205ENST00000587470 UBE2G2P60604 165 aa2.54□□□□□ -2
VMP1-205ENST00000587470 FLI1Q01543 452 aaPredicted RBP2.54□□□□□ -2
VMP1-205ENST00000587470 DAZ2Q13117 558 aaKnown RBP2.54□□□□□ -2
VMP1-205ENST00000587470 RRN3P1Q2M238 152 aa2.54□□□□□ -2
VMP1-205ENST00000587470 TDRG1Q3Y452 100 aa2.54□□□□□ -2
VMP1-205ENST00000587470 TMEM78Q5T7P6 136 aa2.54□□□□□ -2
VMP1-205ENST00000587470 FAM222AQ5U5X8 452 aa2.54□□□□□ -2
VMP1-205ENST00000587470 Q6AWC8 147 aa2.54□□□□□ -2
VMP1-205ENST00000587470 EIF5AL1Q6IS14 154 aaKnown RBP2.54□□□□□ -2
VMP1-205ENST00000587470 CEMP1Q6PRD7 247 aaPredicted RBP2.54□□□□□ -2
VMP1-205ENST00000587470 ALKAL2Q6UX46 152 aa2.54□□□□□ -2
VMP1-205ENST00000587470 ZNF493Q6ZR52 646 aa2.54□□□□□ -2
VMP1-205ENST00000587470 TMEM256Q8N2U0 113 aa2.54□□□□□ -2
VMP1-205ENST00000587470 CYB561D1Q8N8Q1 229 aa2.54□□□□□ -2
VMP1-205ENST00000587470 C11orf72Q8NBR9 251 aa2.54□□□□□ -2
VMP1-205ENST00000587470 CMTM2Q8TAZ6 248 aa2.54□□□□□ -2
VMP1-205ENST00000587470 HIST1H2BAQ96A08 127 aa2.54□□□□□ -2
VMP1-205ENST00000587470 LINC01587Q99440 93 aa2.54□□□□□ -2
VMP1-205ENST00000587470 NKX6-2Q9C056 277 aaPredicted RBP2.54□□□□□ -2
VMP1-205ENST00000587470 PSG8Q9UQ74 426 aa2.54□□□□□ -2
VMP1-205ENST00000587470 KLK5Q9Y337 293 aaPredicted RBP2.54□□□□□ -2
VMP1-205ENST00000587470 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2
VMP1-205ENST00000587470 A0A1B0GV50 99 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TMEM189A5PLL7 270 aa2.53□□□□□ -2
VMP1-205ENST00000587470 F6UZH7 168 aa2.53□□□□□ -2
VMP1-205ENST00000587470 GNRH2O43555 120 aa2.53□□□□□ -2
VMP1-205ENST00000587470 HSBP1O75506 76 aa2.53□□□□□ -2
VMP1-205ENST00000587470 IFNA7P01567 189 aa2.53□□□□□ -2
VMP1-205ENST00000587470 SPART-AS1P0CW21 52 aa2.53□□□□□ -2
VMP1-205ENST00000587470 INAFM2P0DMQ5 153 aa2.53□□□□□ -2
VMP1-205ENST00000587470 EMP1P54849 157 aa2.53□□□□□ -2
VMP1-205ENST00000587470 SLAQ13239 276 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TMEM183BQ1AE95 376 aa2.53□□□□□ -2
VMP1-205ENST00000587470 ZNF767PQ75MW2 155 aa2.53□□□□□ -2
VMP1-205ENST00000587470 PRNTQ86SH4 94 aa2.53□□□□□ -2
VMP1-205ENST00000587470 IQCF2Q8IXL9 164 aa2.53□□□□□ -2
VMP1-205ENST00000587470 EIF4E3Q8N5X7 224 aaKnown RBP2.53□□□□□ -2
VMP1-205ENST00000587470 TMEM75Q8N9X5 138 aa2.53□□□□□ -2
VMP1-205ENST00000587470 ZNF680Q8NEM1 530 aa2.53□□□□□ -2
VMP1-205ENST00000587470 TMEM263Q8WUH6 116 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms