RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ALPK2Q86TB3 2170 aa4.43□□□□□ -1.7
SMAD4-203ENST00000585448 RAI1Q7Z5J4 1906 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-203ENST00000585448 IGHV3-43A0A0B4J1X8 118 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 IGHV5-51A0A0C4DH38 117 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 E7EUB6 86 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 H3BRN7 92 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 IGHV3-43DP0DP04 118 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
SMAD4-203ENST00000585448 DEFB110Q30KQ9 67 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 RPL39P5Q59GN2 51 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 TMEM167AQ8TBQ9 72 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 DCTN5Q9BTE1 182 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
SMAD4-203ENST00000585448 TRAV23DV6A0A075B6W5 121 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 DEFB108AA8MXU0 73 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 PATE4P0C8F1 98 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 MIFP14174 115 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 Q6ZVQ6 151 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 LITAFQ99732 161 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 SPRR3Q9UBC9 169 aa4.41□□□□□ -1.7
SMAD4-203ENST00000585448 SNRNP200O75643 2136 aaKnown RBP4.4□□□□□ -1.7
SMAD4-203ENST00000585448 M0R378 163 aa4.4□□□□□ -1.71
SMAD4-203ENST00000585448 LYZP61626 148 aa4.4□□□□□ -1.71
SMAD4-203ENST00000585448 PHF5AQ7RTV0 110 aaKnown RBP4.4□□□□□ -1.71
SMAD4-203ENST00000585448 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
SMAD4-203ENST00000585448 E7EQL1 145 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 VCYO14598 125 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 SAA1P0DJI8 122 aaPredicted RBP4.39□□□□□ -1.71
SMAD4-203ENST00000585448 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
SMAD4-203ENST00000585448 SPANXN1Q5VSR9 72 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 RMI2Q96E14 147 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 DEC1Q9P2X7 70 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 CCL26Q9Y258 94 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
SMAD4-203ENST00000585448 TRAV12-3A0A0B4J271 114 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV5-10-1A0A0J9YXX1 117 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 H0YGX0 51 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 TSHBP01222 138 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 TRGV3P03979 118 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 SAA2P0DJI9 122 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-203ENST00000585448 CD28P10747 220 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 RNASE4P34096 147 aaKnown RBP4.38□□□□□ -1.71
SMAD4-203ENST00000585448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.38□□□□□ -1.71
SMAD4-203ENST00000585448 CCL13Q99616 98 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 RPP25Q9BUL9 199 aaKnown RBP4.38□□□□□ -1.71
SMAD4-203ENST00000585448 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 CXXC4Q9H2H0 198 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
SMAD4-203ENST00000585448 LTBP2Q14767 1821 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV4OR15-8A0A075B7B6 117 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 A0A087WW49 117 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV3-15A0A0B4J1V0 119 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 K7EMT4 169 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
SMAD4-203ENST00000585448 IGLV3-19P01714 112 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 FUSP35637 526 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMAD4-203ENST00000585448 WT1-ASQ06250 92 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 ECSCRQ19T08 205 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 CXCL17Q6UXB2 119 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 ZNF833PQ6ZTB9 187 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 LCA10Q71F78 164 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
SMAD4-203ENST00000585448 NDUFA12Q9UI09 145 aa4.37□□□□□ -1.71
SMAD4-203ENST00000585448 TET2Q6N021 2002 aaPredicted RBP4.36□□□□□ -1.71
SMAD4-203ENST00000585448 IGKV1D-17A0A075B6S4 117 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV7-4-1A0A0J9YVY3 117 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 F6UB75 175 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 CGB3P0DN86 165 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 CGB7P0DN87 165 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV3-30-3P0DP02 117 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 RPL36AP83881 106 aaKnown RBP4.36□□□□□ -1.71
SMAD4-203ENST00000585448 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 CCL4L1Q8NHW4 92 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 BPESC1Q9GZL8 116 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 CABIN1Q9Y6J0 2220 aa4.36□□□□□ -1.71
SMAD4-203ENST00000585448 IGHV1-18A0A0C4DH31 117 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 LHBP01229 141 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 UBE2AP49459 152 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 HIST2H2BCQ6DN03 193 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 ENHOQ6UWT2 76 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 DEFB126Q9BYW3 111 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 LINC00574Q9H8X3 128 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 SNURFQ9Y675 71 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 MYO7AQ13402 2215 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 SPAG17Q6Q759 2223 aa4.35□□□□□ -1.71
SMAD4-203ENST00000585448 C2orf16Q68DN1 1984 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 GON4LQ3T8J9 2241 aa4.34□□□□□ -1.71
SMAD4-203ENST00000585448 IGKV3D-15A0A087WSY6 115 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms