RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 ATP5G1P05496 136 aa11.76□□□□□ -0.53
GCDH-203ENST00000585420 SRIP30626 198 aa11.76□□□□□ -0.53
GCDH-203ENST00000585420 Q6ZSN1 163 aa11.76□□□□□ -0.53
GCDH-203ENST00000585420 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
GCDH-203ENST00000585420 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
GCDH-203ENST00000585420 HTN3P15516 51 aa11.75□□□□□ -0.53
GCDH-203ENST00000585420 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
GCDH-203ENST00000585420 AKR1D1P51857 326 aa11.75□□□□□ -0.53
GCDH-203ENST00000585420 M0QY20 66 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 FHL2Q14192 279 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 ALKBH7Q9BT30 221 aaPredicted RBP11.74□□□□□ -0.53
GCDH-203ENST00000585420 KMT2AQ03164 3969 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 ALMS1Q8TCU4 4167 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 IGLL5B9A064 214 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 H7C1H1 209 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 HOXA5P20719 270 aa11.74□□□□□ -0.53
GCDH-203ENST00000585420 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
GCDH-203ENST00000585420 F5H768 121 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 K7EQD1 137 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 NPYP01303 97 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 P0DMU3 169 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 OR10J3Q5JRS4 329 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 SMIM6P0DI80 62 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 NRACQ8N912 160 aa11.72□□□□□ -0.53
GCDH-203ENST00000585420 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BKO60814 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 PPP1R17O96001 155 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BJP06899 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BOP23527 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BBP33778 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BDP58876 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BCP62807 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 LAMTOR2Q9Y2Q5 125 aa11.71□□□□□ -0.54
GCDH-203ENST00000585420 LCE6AA0A183 80 aa11.7□□□□□ -0.54
GCDH-203ENST00000585420 RHOHQ15669 191 aa11.7□□□□□ -0.54
GCDH-203ENST00000585420 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
GCDH-203ENST00000585420 PRO0255Q9UI72 69 aa11.7□□□□□ -0.54
GCDH-203ENST00000585420 CRYBA4P53673 196 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 Q9UF83 564 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 LOC389332A0A1B0GUA5 103 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 C18orf32Q8TCD1 76 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 C12orf57Q99622 126 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 MAP1LC3AQ9H492 121 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 APLNQ9ULZ1 77 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
GCDH-203ENST00000585420 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
GCDH-203ENST00000585420 A0A0J9YY99 117 aa11.68□□□□□ -0.54
GCDH-203ENST00000585420 TRBV10-1A0A0K0K1A3 114 aa11.68□□□□□ -0.54
GCDH-203ENST00000585420 PAX4O43316 350 aa11.68□□□□□ -0.54
GCDH-203ENST00000585420 SUMO2P61956 95 aaKnown RBP11.68□□□□□ -0.54
GCDH-203ENST00000585420 NEXN-AS1Q8NBZ9 246 aa11.68□□□□□ -0.54
GCDH-203ENST00000585420 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 GAGE1Q13065 139 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 GAGE4Q13068 117 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 GAGE5Q13069 117 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
GCDH-203ENST00000585420 TRBV6-5A0A0K0K1A5 114 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
GCDH-203ENST00000585420 ZNRF2Q8NHG8 242 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
GCDH-203ENST00000585420 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 NDUFA6P56556 154 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 TCTAP57738 103 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
GCDH-203ENST00000585420 NACAE9PAV3 2078 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 LY6G6CO95867 125 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 GYPEP15421 78 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 Q0VG73 95 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.54
GCDH-203ENST00000585420 IFI27P40305 119 aaPredicted RBP11.64□□□□□ -0.55
GCDH-203ENST00000585420 S100A12P80511 92 aa11.64□□□□□ -0.55
GCDH-203ENST00000585420 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
GCDH-203ENST00000585420 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
GCDH-203ENST00000585420 TMEM70Q9BUB7 260 aa11.64□□□□□ -0.55
GCDH-203ENST00000585420 SMIM2Q9BVW6 85 aa11.64□□□□□ -0.55
GCDH-203ENST00000585420 PMCHP20382 165 aa11.63□□□□□ -0.55
GCDH-203ENST00000585420 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
GCDH-203ENST00000585420 S100A2P29034 98 aa11.63□□□□□ -0.55
GCDH-203ENST00000585420 NXT2Q9NPJ8 142 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms