RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 SRIP30626 198 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
CASC3-209ENST00000583902 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
CASC3-209ENST00000583902 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 VCYO14598 125 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 NCR2O95944 276 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 RPL36AP83881 106 aaKnown RBP6.53□□□□□ -1.36
CASC3-209ENST00000583902 DAZ4Q86SG3 579 aaKnown RBP6.53□□□□□ -1.36
CASC3-209ENST00000583902 NRACQ8N912 160 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
CASC3-209ENST00000583902 ZNF479Q96JC4 524 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 SAMD10Q9BYL1 202 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 JPT2Q9H910 190 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 DAZ3Q9NR90 486 aaKnown RBP6.53□□□□□ -1.36
CASC3-209ENST00000583902 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
CASC3-209ENST00000583902 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 A0A0J9YWU9 116 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 LINC01546A6NGU7 62 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 FHL2Q14192 279 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 C12orf74Q32Q52 190 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 KIAA1644Q3SXP7 199 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 Q8N8P6 123 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 PACRGQ96M98 296 aaPredicted RBP6.52□□□□□ -1.37
CASC3-209ENST00000583902 KIR2DL4Q99706 377 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
CASC3-209ENST00000583902 TRAV10A0A0B4J240 114 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 I3L3M4 83 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
CASC3-209ENST00000583902 LINC00614P0C842 121 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 ESDP10768 282 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 POLR2KP53803 58 aaKnown RBP6.51□□□□□ -1.37
CASC3-209ENST00000583902 SMAGPQ0VAQ4 97 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 SLC25A29Q8N8R3 303 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 RETNQ9HD89 108 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
CASC3-209ENST00000583902 SDHAF1A6NFY7 115 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 DEFB4AO15263 64 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 PAX4O43316 350 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 NPYP01303 97 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 CRYBA4P53673 196 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
CASC3-209ENST00000583902 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 GTSF1LQ9H1H1 148 aa6.5□□□□□ -1.37
CASC3-209ENST00000583902 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 NPSP0C0P6 89 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 TCTAP57738 103 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 TIRAPP58753 221 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 PKIAP61925 76 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 C15orf53Q8NAA6 179 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 NEXN-AS1Q8NBZ9 246 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 CELA1Q9UNI1 258 aa6.49□□□□□ -1.37
CASC3-209ENST00000583902 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 DEFB131BA0A096LNP1 70 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 IGHV3-73A0A0B4J1V6 119 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 F5H768 121 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 H7C423 109 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 HSBP1O75506 76 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 UBE2D3P61077 147 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 UBE2D2P62837 147 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 COTL1Q14019 142 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 LAGE3Q14657 143 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 NIT1Q86X76 327 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 RPL39LQ96EH5 51 aaKnown RBP6.48□□□□□ -1.37
CASC3-209ENST00000583902 ICOSQ9Y6W8 199 aa6.48□□□□□ -1.37
CASC3-209ENST00000583902 IGLV2-18A0A075B6J9 118 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 SMKR1H3BMG3 65 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 LINC00694P0DN24 101 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 FCER1GP30273 86 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
CASC3-209ENST00000583902 NDUFA6P56556 154 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 Q6ZSN1 163 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
CASC3-209ENST00000583902 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 SERF1AO75920 110 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 GYPEP15421 78 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 HOXA5P20719 270 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 S100A2P29034 98 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 AKR1D1P51857 326 aa6.46□□□□□ -1.38
CASC3-209ENST00000583902 Q6ZTC4 211 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms