RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 RPL36ALQ969Q0 106 aaKnown RBP11.16□□□□□ -0.62
RNF43-206ENST00000582293 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
RNF43-206ENST00000582293 TRAV26-2A0A0B4J265 109 aa11.15□□□□□ -0.62
RNF43-206ENST00000582293 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
RNF43-206ENST00000582293 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
RNF43-206ENST00000582293 F8W036 122 aa11.14□□□□□ -0.63
RNF43-206ENST00000582293 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
RNF43-206ENST00000582293 C10orf91Q5T1B1 145 aa11.14□□□□□ -0.63
RNF43-206ENST00000582293 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
RNF43-206ENST00000582293 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 RASL11AQ6T310 242 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 Q8N3U1 123 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
RNF43-206ENST00000582293 PPP1R2P9O14990 202 aa11.12□□□□□ -0.63
RNF43-206ENST00000582293 OR10J3Q5JRS4 329 aa11.12□□□□□ -0.63
RNF43-206ENST00000582293 NTM-AS1Q6ZSK4 140 aa11.12□□□□□ -0.63
RNF43-206ENST00000582293 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 H7C1H1 209 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 RIGQ13278 110 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 RPL39LQ96EH5 51 aaKnown RBP11.11□□□□□ -0.63
RNF43-206ENST00000582293 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
RNF43-206ENST00000582293 DNAH11Q96DT5 4516 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 RAB4AP20338 218 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 LINC01556Q5JQF7 62 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 C1orf134Q5TEV5 83 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 PKD1P98161 4303 aa11.1□□□□□ -0.63
RNF43-206ENST00000582293 A0A087WWC5 75 aa11.09□□□□□ -0.63
RNF43-206ENST00000582293 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
RNF43-206ENST00000582293 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
RNF43-206ENST00000582293 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
RNF43-206ENST00000582293 CARHSP1Q9Y2V2 147 aaKnown RBP11.09□□□□□ -0.63
RNF43-206ENST00000582293 TRBV6-8A0A0A6YYG3 113 aa11.08□□□□□ -0.64
RNF43-206ENST00000582293 Q6ZRN7 208 aaPredicted RBP11.08□□□□□ -0.64
RNF43-206ENST00000582293 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
RNF43-206ENST00000582293 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
RNF43-206ENST00000582293 IGHV3-30P01768 117 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 IGHV3-33P01772 117 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 IGHV3-30-3P0DP02 117 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 IGHV3-30-5P0DP03 117 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 RPS10P46783 165 aaKnown RBP11.07□□□□□ -0.64
RNF43-206ENST00000582293 CAMPP49913 170 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 NIT1Q86X76 327 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 FRZBQ92765 325 aa11.07□□□□□ -0.64
RNF43-206ENST00000582293 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
RNF43-206ENST00000582293 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
RNF43-206ENST00000582293 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
RNF43-206ENST00000582293 HECTD4Q9Y4D8 3996 aa11.06□□□□□ -0.64
RNF43-206ENST00000582293 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 A0A1B0GVY2 172 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 A0A1B0GW15 77 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 NCR2O95944 276 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 HBBP68871 147 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 MRPL51Q4U2R6 128 aaKnown RBP11.05□□□□□ -0.64
RNF43-206ENST00000582293 LINC00336Q6ZUF6 198 aa11.05□□□□□ -0.64
RNF43-206ENST00000582293 IBA57-AS1B1ANH7 110 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 K7EP13 123 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 BTF3P20290 206 aaKnown RBP11.04□□□□□ -0.64
RNF43-206ENST00000582293 TNP2Q05952 138 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 NRACQ8N912 160 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
RNF43-206ENST00000582293 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
RNF43-206ENST00000582293 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
RNF43-206ENST00000582293 CLRN3Q8NCR9 226 aa11.03□□□□□ -0.64
RNF43-206ENST00000582293 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
RNF43-206ENST00000582293 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 C7orf77A4D0Y5 90 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 SDHAF1A6NFY7 115 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 C10orf126Q8N4M7 172 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 IMMP2LQ96T52 175 aa11.02□□□□□ -0.65
RNF43-206ENST00000582293 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
RNF43-206ENST00000582293 POLR2KP53803 58 aaKnown RBP11.01□□□□□ -0.65
RNF43-206ENST00000582293 MPV17L2Q567V2 206 aa11.01□□□□□ -0.65
RNF43-206ENST00000582293 TRBV25-1A0A075B6N4 114 aa11□□□□□ -0.65
RNF43-206ENST00000582293 IGHV1-24A0A0C4DH33 117 aa11□□□□□ -0.65
RNF43-206ENST00000582293 S100A8P05109 93 aa11□□□□□ -0.65
RNF43-206ENST00000582293 SREK1IP1Q8N9Q2 155 aaPredicted RBP11□□□□□ -0.65
RNF43-206ENST00000582293 BTF3L4Q96K17 158 aa11□□□□□ -0.65
RNF43-206ENST00000582293 TMEM70Q9BUB7 260 aa11□□□□□ -0.65
RNF43-206ENST00000582293 TMEM242Q9NWH2 141 aa11□□□□□ -0.65
RNF43-206ENST00000582293 RHEBQ15382 184 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 SLC7A5P1Q8MH63 180 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 Q8N976 141 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 CHCHD7Q9BUK0 85 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
RNF43-206ENST00000582293 TSHBP01222 138 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 GAGE6Q13070 117 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 COTL1Q14019 142 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms