RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PTH2Q96A98 100 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 RNF185Q96GF1 192 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 DEFB4AO15263 64 aa9.66□□□□□ -0.86
CSNK1D-220ENST00000581737 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
CSNK1D-220ENST00000581737 G0S2P27469 103 aa9.66□□□□□ -0.86
CSNK1D-220ENST00000581737 PYY3Q5JQD4 70 aa9.66□□□□□ -0.86
CSNK1D-220ENST00000581737 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CSNK1D-220ENST00000581737 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 A8MWV9 139 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 H7C1H1 209 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 NUPR1O60356 82 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 NCR2O95944 276 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 NPYP01303 97 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 EMP1P54849 157 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 KRTDAPP60985 99 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 Q6ZQT7 251 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 C11orf45Q8TAV5 145 aa9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
CSNK1D-220ENST00000581737 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 PRSS47A8MTI9 375 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 M0R2P5 195 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 RHODO00212 210 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 TCAPO15273 167 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 HBDP02042 147 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 BTF3P20290 206 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 Q8N8P6 123 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 MAP1LC3CQ9BXW4 147 aa9.64□□□□□ -0.87
CSNK1D-220ENST00000581737 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 F5H697 171 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 TSTD3H0UI37 97 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 AZU1P20160 251 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 POM121L12Q8N7R1 296 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
CSNK1D-220ENST00000581737 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 ZNF56Q15929 161 aa9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 FAM222AQ5U5X8 452 aa9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 DKK2Q9UBU2 259 aa9.62□□□□□ -0.87
CSNK1D-220ENST00000581737 PRM2P04554 102 aa9.61□□□□□ -0.87
CSNK1D-220ENST00000581737 SUMO2P61956 95 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-220ENST00000581737 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
CSNK1D-220ENST00000581737 ST20Q9HBF5 79 aa9.61□□□□□ -0.87
CSNK1D-220ENST00000581737 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
CSNK1D-220ENST00000581737 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 DAZ2Q13117 558 aaKnown RBP9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 LAGE3Q14657 143 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 PET117Q6UWS5 81 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 NRACQ8N912 160 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 CELA1Q9UNI1 258 aa9.6□□□□□ -0.87
CSNK1D-220ENST00000581737 CIDEAO60543 219 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 FCER1GP30273 86 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 DAD1P61803 113 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 PKIAP61925 76 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 VAMP8Q9BV40 100 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 NOP10Q9NPE3 64 aaKnown RBP9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 FAT2Q9NYQ8 4349 aa9.59□□□□□ -0.87
CSNK1D-220ENST00000581737 NUPR2A6NF83 97 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 ATP5LO75964 103 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 SUMO4Q6EEV6 95 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 KIF25-AS1Q9Y6Z4 181 aa9.58□□□□□ -0.88
CSNK1D-220ENST00000581737 DYNC1H1Q14204 4646 aaKnown RBP9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 A0A087WWL8 130 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 VCYO14598 125 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 Q6ZTC4 211 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
CSNK1D-220ENST00000581737 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 RASL10AQ92737 203 aa9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
CSNK1D-220ENST00000581737 TRGV1A0A0A0MS02 117 aa9.55□□□□□ -0.88
CSNK1D-220ENST00000581737 PCP4L1A6NKN8 68 aa9.55□□□□□ -0.88
CSNK1D-220ENST00000581737 NUDT3O95989 172 aa9.55□□□□□ -0.88
CSNK1D-220ENST00000581737 CRYGDP07320 174 aa9.55□□□□□ -0.88
CSNK1D-220ENST00000581737 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms