RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 S100A2P29034 98 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 AMTP48728 403 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 GAGE1Q13065 139 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 GAGE4Q13068 117 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 GAGE5Q13069 117 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 FHL2Q14192 279 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 GAGE13Q4V321 117 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 PACRGQ96M98 296 aaPredicted RBP4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 TMEM70Q9BUB7 260 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 DKK2Q9UBU2 259 aa4.35□□□□□ -1.71
RNU4ATAC-201ENST00000580972 A0A0J9YWU9 116 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 SDHAF1A6NFY7 115 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 HSBP1O75506 76 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 TSHBP01222 138 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 HTN3P15516 51 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 SUMO2P61956 95 aaKnown RBP4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 LGALS9BQ3B8N2 356 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 Q8N8P6 123 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
RNU4ATAC-201ENST00000580972 A0A0J9YY99 117 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TRBV6-5A0A0K0K1A5 114 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 SMIM9A6NGZ8 99 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 K7EQD1 137 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 RHODO00212 210 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 MIFP14174 115 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 KRTDAPP60985 99 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 DAD1P61803 113 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 C12orf74Q32Q52 190 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 PIK3CD-AS1Q5SR53 167 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ZFP2Q6ZN57 461 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 Q8N976 141 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 CHCHD1Q96BP2 118 aaKnown RBP4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 C18orf15Q96N68 181 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 C20orf78Q9BR46 151 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NIT2Q9NQR4 276 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 AP5S1Q9NUS5 200 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ZMAT5Q9UDW3 170 aaKnown RBP4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LAMTOR2Q9Y2Q5 125 aa4.33□□□□□ -1.72
RNU4ATAC-201ENST00000580972 A0A096LPF7 62 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TRGV4A0A0C4DH28 118 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LYRM9A8MSI8 78 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 PRSS47A8MTI9 375 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 H0Y8G0 127 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ZNRF2Q8NHG8 242 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TMEM18Q96B42 140 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TM2D3Q9BRN9 247 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 EDA2RQ9HAV5 297 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NXT2Q9NPJ8 142 aaKnown RBP4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TP53TG1Q9Y2A0 90 aa4.32□□□□□ -1.72
RNU4ATAC-201ENST00000580972 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 F5H768 121 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NUDT3O95989 172 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 HBDP02042 147 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 SPART-AS1P0CW21 52 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LINC00694P0DN24 101 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 GYPEP15421 78 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 BTF3P20290 206 aaKnown RBP4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 FCER1GP30273 86 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LAGE3Q14657 143 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NTM-AS1Q6ZSK4 140 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 Q6ZTC4 211 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 VSIG2Q96IQ7 327 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 OPRPNQ99935 248 aaPredicted RBP4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 MUC4Q99102 2169 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 MGAM2Q2M2H8 2515 aa4.31□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TRBV27A0A0K0K1C4 114 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 H7C1H1 209 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 VCYO14598 125 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 LEPROTL1O95214 131 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 CRYBA4P53673 196 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 UBE2D3P61077 147 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 UBE2D2P62837 147 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 DEFA6Q01524 100 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 KRTAP21-3Q3LHN1 58 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 RNASE13Q5GAN3 156 aaKnown RBP4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 CEMP1Q6PRD7 247 aaPredicted RBP4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 SPATA25Q9BR10 227 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 NDUFAF3Q9BU61 184 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 C11orf68Q9H3H3 251 aaKnown RBP4.3□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TRAV26-1A0A087WT03 109 aa4.29□□□□□ -1.72
RNU4ATAC-201ENST00000580972 TRBV6-4A0A1B0GX49 114 aa4.29□□□□□ -1.72
RNU4ATAC-201ENST00000580972 I3L3M4 83 aa4.29□□□□□ -1.72
RNU4ATAC-201ENST00000580972 PAX4O43316 350 aa4.29□□□□□ -1.72
RNU4ATAC-201ENST00000580972 ATP5G1P05496 136 aa4.29□□□□□ -1.72
RNU4ATAC-201ENST00000580972 RPL36AP83881 106 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms