RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 RPS20P60866 119 aaKnown RBP4.84□□□□□ -1.63
CASC3-205ENST00000577605 CCL20P78556 96 aa4.84□□□□□ -1.63
CASC3-205ENST00000577605 C9orf62Q8N4C0 152 aa4.84□□□□□ -1.63
CASC3-205ENST00000577605 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
CASC3-205ENST00000577605 LY96Q9Y6Y9 160 aa4.84□□□□□ -1.63
CASC3-205ENST00000577605 A0A087WWC5 75 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 TRBV10-1A0A0K0K1A3 114 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 A0A1B0GV50 99 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 OR5AL1P0C617 328 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 BCL2P10415 239 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 RPL35P42766 123 aaKnown RBP4.83□□□□□ -1.64
CASC3-205ENST00000577605 LINC01620Q4KN68 170 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.83□□□□□ -1.64
CASC3-205ENST00000577605 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 LYSTQ99698 3801 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 PARLQ9H300 379 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 MSRB1Q9NZV6 116 aa4.83□□□□□ -1.64
CASC3-205ENST00000577605 DYNC2H1Q8NCM8 4307 aaKnown RBP4.83□□□□□ -1.64
CASC3-205ENST00000577605 A0A1B0GVY2 172 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 F2Z2F3 143 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 H3BVH4 76 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 M0R036 132 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 DNAH10OSP0CZ25 163 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 GNG4P50150 75 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 SEC61GP60059 68 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 LELP1Q5T871 98 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 UFSP1Q6NVU6 142 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 GTSF1LQ9H1H1 148 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 MED9Q9NWA0 146 aa4.82□□□□□ -1.64
CASC3-205ENST00000577605 IGHV3-38A0A0C4DH36 116 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 GRIFINA4D1Z8 144 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 TMEM250H0YL14 139 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 SNAI2O43623 268 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 RAB4BP61018 213 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 CACNG7P62955 275 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 GAGE1Q13065 139 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 GAGE4Q13068 117 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 SPANXN1Q5VSR9 72 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 LYPD6BQ8NI32 183 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
CASC3-205ENST00000577605 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 RBFOX3A6NFN3 312 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 M0R381 172 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 P01737 135 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 CRYGDP07320 174 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 SMIM17P0DL12 118 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 PKIAP61925 76 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
CASC3-205ENST00000577605 TMEM97Q5BJF2 176 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 OR10J3Q5JRS4 329 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 ZNF575Q86XF7 245 aa4.8□□□□□ -1.64
CASC3-205ENST00000577605 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
CASC3-205ENST00000577605 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
CASC3-205ENST00000577605 TMSB15BA0A087X1C1 80 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 H7C1H1 209 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 LAGE3Q14657 143 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 ELOBQ15370 118 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 FAM74A4Q5TZK3 123 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 ALKAL2Q6UX46 152 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 FER1L6-AS1Q8NA97 138 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 OR2D3Q8NGH3 330 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 AP1S3Q96PC3 154 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
CASC3-205ENST00000577605 GEMIN7Q9H840 131 aaKnown RBP4.79□□□□□ -1.64
CASC3-205ENST00000577605 TRBV7-3A0A075B6L6 115 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 LOC100131303A0A0U1RQF7 123 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 IBA57-AS1B1ANH7 110 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 RAB4AP20338 218 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 LINC00315P59091 139 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 IFITM2Q01629 132 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 GAGE5Q13069 117 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 OR10G8Q8NGN5 311 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 FRZBQ92765 325 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 DNAJC30Q96LL9 226 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 DERL1Q9BUN8 251 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 SAMD10Q9BYL1 202 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 EIF5A2Q9GZV4 153 aaKnown RBP4.78□□□□□ -1.64
CASC3-205ENST00000577605 SMDT1Q9H4I9 107 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 COX11Q9Y6N1 276 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 URGCP-MRPS24S4R325 110 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
CASC3-205ENST00000577605 TRAV8-3A0A0A6YYJ7 113 aa4.77□□□□□ -1.65
CASC3-205ENST00000577605 IGLC6P0CF74 106 aa4.77□□□□□ -1.65
CASC3-205ENST00000577605 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms