RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 MGPP08493 103 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 NIT1Q86X76 327 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 Q9HAA7 133 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
NUP85-205ENST00000577561 A0A087WTM6 91 aa13.06□□□□□ -0.32
NUP85-205ENST00000577561 M0QY20 66 aa13.06□□□□□ -0.32
NUP85-205ENST00000577561 DAZ4Q86SG3 579 aaKnown RBP13.06□□□□□ -0.32
NUP85-205ENST00000577561 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.06□□□□□ -0.32
NUP85-205ENST00000577561 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
NUP85-205ENST00000577561 DPH3P1Q9H4G8 78 aa13.06□□□□□ -0.32
NUP85-205ENST00000577561 DAZ3Q9NR90 486 aaKnown RBP13.06□□□□□ -0.32
NUP85-205ENST00000577561 TRBV6-8A0A0A6YYG3 113 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 A8MWL6 223 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 H7C1H1 209 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 TWIST1Q15672 202 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 SUMO4Q6EEV6 95 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 URGCP-MRPS24S4R325 110 aa13.05□□□□□ -0.32
NUP85-205ENST00000577561 PSCAO43653 123 aa13.04□□□□□ -0.32
NUP85-205ENST00000577561 CT83Q5H943 113 aa13.04□□□□□ -0.32
NUP85-205ENST00000577561 DNAJC30Q96LL9 226 aa13.04□□□□□ -0.32
NUP85-205ENST00000577561 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
NUP85-205ENST00000577561 RYR1P21817 5038 aa13.04□□□□□ -0.32
NUP85-205ENST00000577561 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
NUP85-205ENST00000577561 A0A087WX48 190 aa13.02□□□□□ -0.33
NUP85-205ENST00000577561 TRAV8-3A0A0A6YYJ7 113 aa13.02□□□□□ -0.33
NUP85-205ENST00000577561 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.33
NUP85-205ENST00000577561 FAM74A3Q4VXF1 159 aa13.02□□□□□ -0.33
NUP85-205ENST00000577561 TMEM97Q5BJF2 176 aa13.02□□□□□ -0.33
NUP85-205ENST00000577561 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
NUP85-205ENST00000577561 C9JQL5 133 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 PEA15Q15121 130 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 TMEM241Q24JQ0 296 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 RASL11AQ6T310 242 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 TM2D2Q9BX73 214 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 SMDT1Q9H4I9 107 aa13.01□□□□□ -0.33
NUP85-205ENST00000577561 SRSF3P84103 164 aaKnown RBP13□□□□□ -0.33
NUP85-205ENST00000577561 CDPF1Q6NVV7 123 aa13□□□□□ -0.33
NUP85-205ENST00000577561 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
NUP85-205ENST00000577561 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 TMEM262E9PQX1 116 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 ELOBQ15370 118 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 TSKUQ8WUA8 353 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 NIT2Q9NQR4 276 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 HSPG2P98160 4391 aa12.99□□□□□ -0.33
NUP85-205ENST00000577561 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
NUP85-205ENST00000577561 CDK2AP2O75956 126 aa12.98□□□□□ -0.33
NUP85-205ENST00000577561 PKIAP61925 76 aa12.98□□□□□ -0.33
NUP85-205ENST00000577561 ISOC2Q96AB3 205 aa12.98□□□□□ -0.33
NUP85-205ENST00000577561 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
NUP85-205ENST00000577561 FUSP35637 526 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUP85-205ENST00000577561 RPL23P62829 140 aaKnown RBP12.97□□□□□ -0.33
NUP85-205ENST00000577561 C15orf54Q8N8G6 183 aa12.97□□□□□ -0.33
NUP85-205ENST00000577561 APOBP04114 4563 aaKnown RBP12.97□□□□□ -0.33
NUP85-205ENST00000577561 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 HIGD1CA8MV81 97 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 IQCJQ1A5X6 159 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 GATD1Q8NB37 220 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 FRZBQ92765 325 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 BORCS7Q96B45 105 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 NAT8Q9UHE5 227 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 V9GYV3 84 aa12.96□□□□□ -0.33
NUP85-205ENST00000577561 MPV17L2Q567V2 206 aa12.95□□□□□ -0.34
NUP85-205ENST00000577561 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
NUP85-205ENST00000577561 RMI2Q96E14 147 aa12.95□□□□□ -0.34
NUP85-205ENST00000577561 TRAV26-2A0A0B4J265 109 aa12.94□□□□□ -0.34
NUP85-205ENST00000577561 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
NUP85-205ENST00000577561 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
NUP85-205ENST00000577561 ADIRFQ15847 76 aa12.94□□□□□ -0.34
NUP85-205ENST00000577561 Q0VG73 95 aa12.93□□□□□ -0.34
NUP85-205ENST00000577561 ATRAIDQ6UW56 229 aa12.93□□□□□ -0.34
NUP85-205ENST00000577561 Q8N814 137 aa12.93□□□□□ -0.34
NUP85-205ENST00000577561 ANGP03950 147 aaKnown RBP12.92□□□□□ -0.34
NUP85-205ENST00000577561 GAGE6Q13070 117 aa12.92□□□□□ -0.34
NUP85-205ENST00000577561 MAPKAPK5-AS1Q8N8E1 139 aa12.92□□□□□ -0.34
NUP85-205ENST00000577561 Q8N976 141 aa12.92□□□□□ -0.34
NUP85-205ENST00000577561 NTN5Q8WTR8 489 aaPredicted RBP12.92□□□□□ -0.34
NUP85-205ENST00000577561 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
NUP85-205ENST00000577561 RBX1P62877 108 aa12.91□□□□□ -0.34
NUP85-205ENST00000577561 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
NUP85-205ENST00000577561 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
NUP85-205ENST00000577561 RAB14P61106 215 aa12.9□□□□□ -0.34
NUP85-205ENST00000577561 WFDC2Q14508 124 aa12.9□□□□□ -0.34
NUP85-205ENST00000577561 NUP35Q8NFH5 326 aa12.9□□□□□ -0.34
NUP85-205ENST00000577561 RPL39LQ96EH5 51 aaKnown RBP12.9□□□□□ -0.34
NUP85-205ENST00000577561 TMEM243Q9BU79 118 aa12.9□□□□□ -0.34
NUP85-205ENST00000577561 CRPP02741 224 aa12.89□□□□□ -0.35
NUP85-205ENST00000577561 COTL1Q14019 142 aa12.89□□□□□ -0.35
NUP85-205ENST00000577561 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
NUP85-205ENST00000577561 IGLV5-52A0A0A0MRZ9 124 aa12.88□□□□□ -0.35
NUP85-205ENST00000577561 GCSHP23434 173 aa12.88□□□□□ -0.35
NUP85-205ENST00000577561 RIGQ13278 110 aa12.88□□□□□ -0.35
NUP85-205ENST00000577561 DEFB104AQ8WTQ1 72 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms