RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TOR2AQ5JU69 321 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 KCNIP4Q6PIL6 250 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 Q8N814 137 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 K7EN84 100 aa11.83□□□□□ -0.52
CTDNEP1-207ENST00000572043 GCSHP23434 173 aa11.83□□□□□ -0.52
CTDNEP1-207ENST00000572043 CACNG7P62955 275 aa11.83□□□□□ -0.52
CTDNEP1-207ENST00000572043 WFDC2Q14508 124 aa11.83□□□□□ -0.52
CTDNEP1-207ENST00000572043 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
CTDNEP1-207ENST00000572043 HSPG2P98160 4391 aa11.82□□□□□ -0.52
CTDNEP1-207ENST00000572043 TRBV6-8A0A0A6YYG3 113 aa11.82□□□□□ -0.52
CTDNEP1-207ENST00000572043 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.82□□□□□ -0.52
CTDNEP1-207ENST00000572043 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
CTDNEP1-207ENST00000572043 IGKV2D-24A0A075B6R9 120 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 F2Z2F3 143 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 Q8N1X5 172 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 CHCHD5Q9BSY4 110 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
CTDNEP1-207ENST00000572043 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
CTDNEP1-207ENST00000572043 NTF3P20783 257 aa11.8□□□□□ -0.52
CTDNEP1-207ENST00000572043 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
CTDNEP1-207ENST00000572043 M0QY20 66 aa11.79□□□□□ -0.52
CTDNEP1-207ENST00000572043 HAMPP81172 84 aa11.79□□□□□ -0.52
CTDNEP1-207ENST00000572043 C15orf54Q8N8G6 183 aa11.79□□□□□ -0.52
CTDNEP1-207ENST00000572043 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
CTDNEP1-207ENST00000572043 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 TRGC1P0CF51 173 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 XGP55808 180 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 ELOBQ15370 118 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 TWIST1Q15672 202 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 RMI2Q96E14 147 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 EIF5A2Q9GZV4 153 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-207ENST00000572043 APOBP04114 4563 aaKnown RBP11.77□□□□□ -0.52
CTDNEP1-207ENST00000572043 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 H7C1H1 209 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 CTRLP40313 264 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 GAGE6Q13070 117 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 Q8N976 141 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.53
CTDNEP1-207ENST00000572043 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
CTDNEP1-207ENST00000572043 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
CTDNEP1-207ENST00000572043 CRPP02741 224 aa11.75□□□□□ -0.53
CTDNEP1-207ENST00000572043 TMEM97Q5BJF2 176 aa11.75□□□□□ -0.53
CTDNEP1-207ENST00000572043 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
CTDNEP1-207ENST00000572043 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
CTDNEP1-207ENST00000572043 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
CTDNEP1-207ENST00000572043 TRBV25-1A0A075B6N4 114 aa11.74□□□□□ -0.53
CTDNEP1-207ENST00000572043 ATRAIDQ6UW56 229 aa11.74□□□□□ -0.53
CTDNEP1-207ENST00000572043 CLPSL2Q6UWE3 100 aa11.74□□□□□ -0.53
CTDNEP1-207ENST00000572043 ENHOQ6UWT2 76 aa11.74□□□□□ -0.53
CTDNEP1-207ENST00000572043 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 Q0VG73 95 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 WDR73Q6P4I2 378 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 PGLYRP4Q96LB8 373 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 SMIM7Q9BQ49 75 aa11.73□□□□□ -0.53
CTDNEP1-207ENST00000572043 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 RBX1P62877 108 aa11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 C1orf43Q9BWL3 253 aa11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
CTDNEP1-207ENST00000572043 ABCA13Q86UQ4 5058 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 EPM2AB3EWF7 344 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 SRP19P09132 144 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 PKIAP61925 76 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 IQCJQ1A5X6 159 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 LINC01620Q4KN68 170 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 FAM30AQ9NZY2 134 aa11.71□□□□□ -0.53
CTDNEP1-207ENST00000572043 LINC01551Q86U37 167 aa11.7□□□□□ -0.54
CTDNEP1-207ENST00000572043 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
CTDNEP1-207ENST00000572043 A8MWL6 223 aa11.69□□□□□ -0.54
CTDNEP1-207ENST00000572043 HLA-DQA1P01909 254 aa11.69□□□□□ -0.54
CTDNEP1-207ENST00000572043 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
CTDNEP1-207ENST00000572043 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
CTDNEP1-207ENST00000572043 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
CTDNEP1-207ENST00000572043 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
CTDNEP1-207ENST00000572043 TMEM70Q9BUB7 260 aa11.68□□□□□ -0.54
CTDNEP1-207ENST00000572043 Q5VSD8 79 aa11.67□□□□□ -0.54
CTDNEP1-207ENST00000572043 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
CTDNEP1-207ENST00000572043 AMTP48728 403 aa11.66□□□□□ -0.54
CTDNEP1-207ENST00000572043 COTL1Q14019 142 aa11.66□□□□□ -0.54
CTDNEP1-207ENST00000572043 MIAQ16674 131 aa11.66□□□□□ -0.54
CTDNEP1-207ENST00000572043 CT83Q5H943 113 aa11.66□□□□□ -0.54
CTDNEP1-207ENST00000572043 FRZBQ92765 325 aa11.66□□□□□ -0.54
CTDNEP1-207ENST00000572043 IGLV4-60A0A075B6I1 120 aa11.65□□□□□ -0.54
CTDNEP1-207ENST00000572043 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms