RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 COX6CP09669 75 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 FAM74A4Q5TZK3 123 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 C5orf56Q8N8D9 126 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 DUX3Q96PT4 197 aa12.48□□□□□ -0.41
LITAF-209ENST00000571688 SVEP1Q4LDE5 3571 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 LINC01587Q99440 93 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 TMEM126AQ9H061 195 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 BRI3O95415 125 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 CLEC2BQ92478 149 aa12.47□□□□□ -0.41
LITAF-209ENST00000571688 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.41
LITAF-209ENST00000571688 SAA4P35542 130 aa12.46□□□□□ -0.41
LITAF-209ENST00000571688 ADAMTSL4-AS1Q5T5F5 129 aa12.46□□□□□ -0.41
LITAF-209ENST00000571688 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
LITAF-209ENST00000571688 GRNP28799 593 aaKnown RBP12.46□□□□□ -0.42
LITAF-209ENST00000571688 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.42
LITAF-209ENST00000571688 TMEM95Q3KNT9 176 aa12.46□□□□□ -0.42
LITAF-209ENST00000571688 C9orf85Q96MD7 179 aa12.46□□□□□ -0.42
LITAF-209ENST00000571688 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.42
LITAF-209ENST00000571688 PRSS2P07478 247 aa12.45□□□□□ -0.42
LITAF-209ENST00000571688 SPXQ9BT56 116 aa12.45□□□□□ -0.42
LITAF-209ENST00000571688 MIAQ16674 131 aa12.45□□□□□ -0.42
LITAF-209ENST00000571688 CACNA1HO95180 2353 aa12.45□□□□□ -0.42
LITAF-209ENST00000571688 C11orf71Q6IPW1 123 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 IGKV3-7A0A075B6H7 116 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 TRGV11A0A075B6L2 103 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 Q6ZSV7 163 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
LITAF-209ENST00000571688 I3L3M4 83 aa12.43□□□□□ -0.42
LITAF-209ENST00000571688 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
LITAF-209ENST00000571688 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
LITAF-209ENST00000571688 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
LITAF-209ENST00000571688 TMEM101Q96IK0 257 aa12.43□□□□□ -0.42
LITAF-209ENST00000571688 TRAV8-3A0A0A6YYJ7 113 aa12.42□□□□□ -0.42
LITAF-209ENST00000571688 TMEM61Q8N0U2 210 aa12.42□□□□□ -0.42
LITAF-209ENST00000571688 ANKHD1Q8IWZ3 2542 aaKnown RBP12.42□□□□□ -0.42
LITAF-209ENST00000571688 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
LITAF-209ENST00000571688 FAM104AQ969W3 186 aa12.42□□□□□ -0.42
LITAF-209ENST00000571688 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
LITAF-209ENST00000571688 IMUPQ9GZP8 106 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 VPREB3Q9UKI3 123 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 ANKRD11Q6UB99 2663 aaPredicted RBP12.41□□□□□ -0.42
LITAF-209ENST00000571688 PYGO1Q9Y3Y4 419 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 ZFHX3Q15911 3703 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
LITAF-209ENST00000571688 OTOGLQ3ZCN5 2332 aa12.4□□□□□ -0.42
LITAF-209ENST00000571688 TMEM219Q86XT9 240 aa12.4□□□□□ -0.42
LITAF-209ENST00000571688 ACACAQ13085 2346 aa12.4□□□□□ -0.42
LITAF-209ENST00000571688 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.43
LITAF-209ENST00000571688 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.43
LITAF-209ENST00000571688 FBXL19-AS1Q494R0 122 aa12.4□□□□□ -0.43
LITAF-209ENST00000571688 BDP1A6H8Y1 2624 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 ACYP1P07311 99 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 CD28P10747 220 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 NPC2P61916 151 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 MOB4Q9Y3A3 225 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
LITAF-209ENST00000571688 LY6DQ14210 128 aa12.38□□□□□ -0.43
LITAF-209ENST00000571688 VSIG2Q96IQ7 327 aa12.38□□□□□ -0.43
LITAF-209ENST00000571688 YAE1D1Q9NRH1 226 aa12.38□□□□□ -0.43
LITAF-209ENST00000571688 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
LITAF-209ENST00000571688 NPFFO15130 113 aa12.38□□□□□ -0.43
LITAF-209ENST00000571688 RELNP78509 3460 aa12.37□□□□□ -0.43
LITAF-209ENST00000571688 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
LITAF-209ENST00000571688 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
LITAF-209ENST00000571688 HRNRQ86YZ3 2850 aaPredicted RBP12.37□□□□□ -0.43
LITAF-209ENST00000571688 AKAP13Q12802 2813 aa12.37□□□□□ -0.43
LITAF-209ENST00000571688 TIMM17BO60830 172 aa12.36□□□□□ -0.43
LITAF-209ENST00000571688 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
LITAF-209ENST00000571688 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
LITAF-209ENST00000571688 TINCRA0A1B0GVN0 87 aa12.35□□□□□ -0.43
LITAF-209ENST00000571688 A8MZ25 164 aa12.35□□□□□ -0.43
LITAF-209ENST00000571688 ID1P41134 155 aa12.35□□□□□ -0.43
LITAF-209ENST00000571688 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
LITAF-209ENST00000571688 USMG5Q96IX5 58 aa12.35□□□□□ -0.43
LITAF-209ENST00000571688 SMCR5Q8TEV8 140 aa12.35□□□□□ -0.43
LITAF-209ENST00000571688 DAZ1Q9NQZ3 744 aaKnown RBP12.34□□□□□ -0.43
LITAF-209ENST00000571688 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
LITAF-209ENST00000571688 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.44
LITAF-209ENST00000571688 CITED2Q99967 270 aaPredicted RBP12.33□□□□□ -0.44
LITAF-209ENST00000571688 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
LITAF-209ENST00000571688 H3BUA1 57 aa12.33□□□□□ -0.44
LITAF-209ENST00000571688 EDN2P20800 178 aa12.33□□□□□ -0.44
LITAF-209ENST00000571688 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
LITAF-209ENST00000571688 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
LITAF-209ENST00000571688 LINC00643Q86TS7 51 aa12.32□□□□□ -0.44
LITAF-209ENST00000571688 EDA2RQ9HAV5 297 aa12.32□□□□□ -0.44
LITAF-209ENST00000571688 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
LITAF-209ENST00000571688 SDIM1Q6ZPB5 146 aa12.32□□□□□ -0.44
LITAF-209ENST00000571688 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
LITAF-209ENST00000571688 NDUFA7O95182 113 aa12.31□□□□□ -0.44
LITAF-209ENST00000571688 CDSNQ15517 529 aa12.31□□□□□ -0.44
LITAF-209ENST00000571688 UQCRQO14949 82 aa12.3□□□□□ -0.44
LITAF-209ENST00000571688 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
LITAF-209ENST00000571688 DAND5Q8N907 189 aa12.3□□□□□ -0.44
LITAF-209ENST00000571688 NRGNQ92686 78 aa12.3□□□□□ -0.44
LITAF-209ENST00000571688 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
LITAF-209ENST00000571688 COX7A2LO14548 114 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms