RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 ELOBQ15370 118 aa10.9□□□□□ -0.66
SPG7-218ENST00000568205 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
SPG7-218ENST00000568205 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
SPG7-218ENST00000568205 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.66
SPG7-218ENST00000568205 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
SPG7-218ENST00000568205 SMCO4Q9NRQ5 59 aa10.9□□□□□ -0.66
SPG7-218ENST00000568205 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
SPG7-218ENST00000568205 NEGR1Q7Z3B1 354 aa10.89□□□□□ -0.67
SPG7-218ENST00000568205 SH2D6Q7Z4S9 175 aa10.89□□□□□ -0.67
SPG7-218ENST00000568205 ZNRF2Q8NHG8 242 aa10.89□□□□□ -0.67
SPG7-218ENST00000568205 TRBV7-3A0A075B6L6 115 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 DNAJC30Q96LL9 226 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
SPG7-218ENST00000568205 GAS8-AS1O95177 125 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 NCR2O95944 276 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 S100A1P23297 94 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 UBE2D3P61077 147 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 UBE2D2P62837 147 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 COX19Q49B96 90 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 RPL39LQ96EH5 51 aaKnown RBP10.87□□□□□ -0.67
SPG7-218ENST00000568205 YPEL4Q96NS1 127 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
SPG7-218ENST00000568205 SMKR1H3BMG3 65 aa10.86□□□□□ -0.67
SPG7-218ENST00000568205 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
SPG7-218ENST00000568205 HLA-DQA1P01909 254 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 CKS2P33552 79 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 RPS10P46783 165 aaKnown RBP10.85□□□□□ -0.67
SPG7-218ENST00000568205 CCL18P55774 89 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 ESRGQ1W209 222 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 OR10J3Q5JRS4 329 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 ALMS1Q8TCU4 4167 aa10.85□□□□□ -0.67
SPG7-218ENST00000568205 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 D6R8Y8 96 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 PPBPP02775 128 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 MT-ND6P03923 174 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 TIRAPP58753 221 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 LYPD5Q6UWN5 251 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 NRACQ8N912 160 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
SPG7-218ENST00000568205 SCO1O75880 301 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 PPP1R17O96001 155 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 LGALS9CQ6DKI2 356 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 ORMDL3Q8N138 153 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
SPG7-218ENST00000568205 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
SPG7-218ENST00000568205 APCSP02743 223 aa10.82□□□□□ -0.68
SPG7-218ENST00000568205 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
SPG7-218ENST00000568205 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.82□□□□□ -0.68
SPG7-218ENST00000568205 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
SPG7-218ENST00000568205 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
SPG7-218ENST00000568205 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
SPG7-218ENST00000568205 MRPS16Q9Y3D3 137 aaKnown RBP10.82□□□□□ -0.68
SPG7-218ENST00000568205 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
SPG7-218ENST00000568205 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
SPG7-218ENST00000568205 PHOX2AO14813 284 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 TNFRSF6BO95407 300 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 LY6G6CO95867 125 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 NPYP01303 97 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 TMEM70Q9BUB7 260 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
SPG7-218ENST00000568205 DNAH1Q9P2D7 4330 aa10.8□□□□□ -0.68
SPG7-218ENST00000568205 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
SPG7-218ENST00000568205 FABP9Q0Z7S8 132 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 KIAA1644Q3SXP7 199 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 LELP1Q5T871 98 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 C20orf78Q9BR46 151 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 UPK3BQ9BT76 320 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 LAMTOR2Q9Y2Q5 125 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 TRAPPC1Q9Y5R8 145 aa10.79□□□□□ -0.68
SPG7-218ENST00000568205 POLR2KP53803 58 aaKnown RBP10.78□□□□□ -0.68
SPG7-218ENST00000568205 TMEM97Q5BJF2 176 aa10.78□□□□□ -0.68
SPG7-218ENST00000568205 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 TRAV8-6A0A0B4J262 113 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 LCE6AA0A183 80 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 COLCA2A8K830 154 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 I3L3M4 83 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.69
SPG7-218ENST00000568205 COTL1Q14019 142 aa10.77□□□□□ -0.69
SPG7-218ENST00000568205 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
SPG7-218ENST00000568205 VCYO14598 125 aa10.76□□□□□ -0.69
SPG7-218ENST00000568205 PMCHP20382 165 aa10.76□□□□□ -0.69
SPG7-218ENST00000568205 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
SPG7-218ENST00000568205 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
SPG7-218ENST00000568205 WFDC10BQ8IUB3 73 aa10.75□□□□□ -0.69
SPG7-218ENST00000568205 ALKBH7Q9BT30 221 aaPredicted RBP10.75□□□□□ -0.69
SPG7-218ENST00000568205 SMIM2Q9BVW6 85 aa10.75□□□□□ -0.69
SPG7-218ENST00000568205 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 TSHBP01222 138 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 RAB5AP20339 215 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 IQCJQ1A5X6 159 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 MAP1LC3AQ9H492 121 aa10.74□□□□□ -0.69
SPG7-218ENST00000568205 LYSTQ99698 3801 aa10.73□□□□□ -0.69
SPG7-218ENST00000568205 PRSS47A8MTI9 375 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms