RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
TCF4-239ENST00000568186 MDC1Q14676 2089 aaKnown RBP1.24□□□□□ -2.21
TCF4-239ENST00000568186 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
TCF4-239ENST00000568186 KIAA1551Q9HCM1 1747 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 CR1P17927 2039 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 PTPRFP10586 1907 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 KDM6BO15054 1643 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 TEX49A0A1B0GTD5 131 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 LOC101927531A0A1B0GV80 90 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 SIX6O95475 246 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 IGLC1P0CG04 106 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 UBE2D1P51668 147 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 Q0VG73 95 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 SCP2D1Q9UJQ7 156 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 DCAF1Q9Y4B6 1507 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 CCDC18Q5T9S5 1454 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 ARAP2Q8WZ64 1704 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 ABCA3Q99758 1704 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 RTTNQ86VV8 2226 aa1.23□□□□□ -2.21
TCF4-239ENST00000568186 ZNF142P52746 1687 aaPredicted RBP1.23□□□□□ -2.21
TCF4-239ENST00000568186 ANKRD36BQ8N2N9 1353 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 BAHCC1Q9P281 2608 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 UNC13CQ8NB66 2214 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 NBDYA0A0U1RRE5 68 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 hADV29S1A0JD25 119 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 GNGT2O14610 69 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 PYY3Q5JQD4 70 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 XAF1Q6GPH4 301 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 ZNF818PQ6ZRF7 136 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 CYP2G1PQ6ZSU1 146 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 CYP4F30PQ9H0H9 118 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 TNS1Q9HBL0 1735 aaKnown RBP1.22□□□□□ -2.21
TCF4-239ENST00000568186 PLEKHH2Q8IVE3 1493 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 SHANK2Q9UPX8 1470 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 ICE1Q9Y2F5 2266 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 PHIPQ8WWQ0 1821 aa1.22□□□□□ -2.21
TCF4-239ENST00000568186 LAMC3Q9Y6N6 1575 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 CACNA1GO43497 2377 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 NWD2Q9ULI1 1742 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 MED12LQ86YW9 2145 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 GOLGA3Q08378 1498 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 TRBV7-1A0A0A6YYK4 115 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 IGKV2-29A2NJV5 120 aaPredicted RBP1.21□□□□□ -2.22
TCF4-239ENST00000568186 CLPSL1A2RUU4 121 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 GNG11P61952 73 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 FXYD3Q14802 87 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 FAM213BQ8TBF2 198 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 MYOZ3Q8TDC0 251 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 TSLPQ969D9 159 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 PMCHL2Q9BQD1 86 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 PRO1933Q9H354 126 aa1.21□□□□□ -2.22
TCF4-239ENST00000568186 MYOFQ9NZM1 2061 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 PRDM15P57071 1507 aaPredicted RBP1.2□□□□□ -2.22
TCF4-239ENST00000568186 KDM5AP29375 1690 aaKnown RBP1.2□□□□□ -2.22
TCF4-239ENST00000568186 ALPK2Q86TB3 2170 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 PXDNQ92626 1479 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 ARHGAP35Q9NRY4 1499 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 PHRF1Q9P1Y6 1649 aaKnown RBP1.2□□□□□ -2.22
TCF4-239ENST00000568186 NAP1L6A6NFF2 107 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 Q6ZQY7 126 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 C20orf197Q8N268 126 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 NPVFQ9HCQ7 196 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 BLMP54132 1417 aaPredicted RBP1.2□□□□□ -2.22
TCF4-239ENST00000568186 PTPRDP23468 1912 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 MUC6Q6W4X9 2439 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 CHD1O14646 1710 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 GBF1Q92538 1859 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 FREM1Q5H8C1 2179 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 ARFGEF3Q5TH69 2177 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 ABCC3O15438 1527 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 COL4A1P02462 1669 aa1.2□□□□□ -2.22
TCF4-239ENST00000568186 DLEC1Q9Y238 1755 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 CRYM-AS1A6NIL9 109 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 ATOX1O00244 68 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 CCL3L1P16619 93 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 ASIPP42127 132 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 KRTDAPP60985 99 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 C10orf128Q5T292 105 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 C5orf56Q8N8D9 126 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 LCN9Q8WX39 176 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 MARF1Q9Y4F3 1742 aaKnown RBP1.19□□□□□ -2.22
TCF4-239ENST00000568186 PATJQ8NI35 1801 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 TNRC6BQ9UPQ9 1833 aaKnown RBP1.19□□□□□ -2.22
TCF4-239ENST00000568186 TET3O43151 1660 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 RREB1Q92766 1687 aa1.19□□□□□ -2.22
TCF4-239ENST00000568186 TRBV7-3A0A075B6L6 115 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 NCR3O14931 201 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 CAV3P56539 151 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 SEC11AP67812 179 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 SSBP1Q04837 148 aaKnown RBP1.18□□□□□ -2.22
TCF4-239ENST00000568186 ZNF56Q15929 161 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 PPP1R1CQ8WVI7 109 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 LINC00208Q96KT6 92 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 CCL19Q99731 98 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 ARHGEF12Q9NZN5 1544 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 NRXN2Q9P2S2 1712 aa1.18□□□□□ -2.22
TCF4-239ENST00000568186 TNRC6AQ8NDV7 1962 aaKnown RBP1.17□□□□□ -2.22
TCF4-239ENST00000568186 NINQ8N4C6 2090 aa1.17□□□□□ -2.22
TCF4-239ENST00000568186 TRBV7-7A0A0K0K1E9 115 aa1.17□□□□□ -2.22
TCF4-239ENST00000568186 EFNA4P52798 201 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms