RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 MT-ND6P03923 174 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 FLI1Q01543 452 aaPredicted RBP8.34□□□□□ -1.07
SMG1-213ENST00000567737 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 DERL1Q9BUN8 251 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 PHLDA3Q9Y5J5 127 aa8.34□□□□□ -1.07
SMG1-213ENST00000567737 B4DEV8 164 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 EIF3GO75821 320 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG1-213ENST00000567737 TCRAP04437 139 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 RAB4BP61018 213 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 RAB2AP61019 212 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 ZNF56Q15929 161 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 SAPCD1Q5SSQ6 148 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 C20orf203Q8NBC4 194 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 OR5C1Q8NGR4 320 aa8.33□□□□□ -1.08
SMG1-213ENST00000567737 WDR61Q9GZS3 305 aaKnown RBP8.33□□□□□ -1.08
SMG1-213ENST00000567737 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 FABP5P3A8MUU1 101 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 TPT1P13693 172 aaKnown RBP8.32□□□□□ -1.08
SMG1-213ENST00000567737 NHLH2Q02577 135 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 C1orf137Q5JT78 98 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 PQLC2Q6ZP29 291 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 KRTAP9-9Q9BYP9 154 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 KRTAP9-4Q9BYQ2 154 aa8.32□□□□□ -1.08
SMG1-213ENST00000567737 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 GAGE12HA6NDE8 117 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 NAP1L6A6NFF2 107 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 UBE2D1P51668 147 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 ZFP82Q8N141 532 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
SMG1-213ENST00000567737 TRAV6A0A075B6T7 132 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 SULT1A2P50226 295 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 RAB32Q13637 225 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
SMG1-213ENST00000567737 IGLV4-60A0A075B6I1 120 aa8.29□□□□□ -1.08
SMG1-213ENST00000567737 M0R036 132 aa8.29□□□□□ -1.08
SMG1-213ENST00000567737 AQP10Q96PS8 301 aa8.29□□□□□ -1.08
SMG1-213ENST00000567737 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
SMG1-213ENST00000567737 A0A1B0GUV1 79 aa8.28□□□□□ -1.08
SMG1-213ENST00000567737 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
SMG1-213ENST00000567737 H0Y9J4 135 aa8.28□□□□□ -1.08
SMG1-213ENST00000567737 RPL13AP40429 203 aaKnown RBP8.28□□□□□ -1.08
SMG1-213ENST00000567737 V9GYH0 126 aa8.28□□□□□ -1.08
SMG1-213ENST00000567737 A0A1W2PPV4 95 aa8.27□□□□□ -1.09
SMG1-213ENST00000567737 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
SMG1-213ENST00000567737 LCE4AQ5TA78 99 aa8.26□□□□□ -1.09
SMG1-213ENST00000567737 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
SMG1-213ENST00000567737 F5H697 171 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 H3BMQ9 156 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 TSPAN13O95857 204 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 AMTP48728 403 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 PTTG1IPP53801 180 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 IL15RAQ13261 267 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 EPDR1Q9UM22 224 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 ARL2-SNX15V9GYD0 113 aa8.25□□□□□ -1.09
SMG1-213ENST00000567737 IGKV3OR2-268A0A0C4DH90 116 aa8.24□□□□□ -1.09
SMG1-213ENST00000567737 B5MCH6 92 aa8.24□□□□□ -1.09
SMG1-213ENST00000567737 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
SMG1-213ENST00000567737 TMBIM6P55061 237 aa8.24□□□□□ -1.09
SMG1-213ENST00000567737 CYCSP99999 105 aaKnown RBP8.24□□□□□ -1.09
SMG1-213ENST00000567737 TMEM243Q9BU79 118 aa8.24□□□□□ -1.09
SMG1-213ENST00000567737 TMSB15BA0A087X1C1 80 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 GAGE2BQ13066 116 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 CNPY1Q3B7I2 92 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 SCGB1C1Q8TD33 95 aa8.23□□□□□ -1.09
SMG1-213ENST00000567737 TRAV34A0A0B4J273 112 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 CENPXA8MT69 81 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 UBE2L6O14933 153 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 ARL14EPLP0DKL9 152 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 EIF5AP63241 154 aaKnown RBP8.22□□□□□ -1.09
SMG1-213ENST00000567737 TRIQKQ629K1 86 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
SMG1-213ENST00000567737 RBM38Q9H0Z9 239 aaKnown RBP8.22□□□□□ -1.09
SMG1-213ENST00000567737 KRTAP9-7A8MTY7 169 aa8.21□□□□□ -1.1
SMG1-213ENST00000567737 SH2D1AO60880 128 aa8.21□□□□□ -1.1
SMG1-213ENST00000567737 BTCP35070 178 aa8.21□□□□□ -1.1
SMG1-213ENST00000567737 CRIP1P50238 77 aa8.21□□□□□ -1.1
SMG1-213ENST00000567737 ZNF674Q2M3X9 581 aa8.21□□□□□ -1.1
SMG1-213ENST00000567737 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
SMG1-213ENST00000567737 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
SMG1-213ENST00000567737 S100A5P33763 92 aa8.2□□□□□ -1.1
SMG1-213ENST00000567737 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
SMG1-213ENST00000567737 SEC22CQ9BRL7 303 aa8.2□□□□□ -1.1
SMG1-213ENST00000567737 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
SMG1-213ENST00000567737 MUC17Q685J3 4493 aa8.19□□□□□ -1.1
SMG1-213ENST00000567737 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
SMG1-213ENST00000567737 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
SMG1-213ENST00000567737 C9orf116Q5BN46 136 aaPredicted RBP8.19□□□□□ -1.1
SMG1-213ENST00000567737 FAM162BQ5T6X4 162 aa8.19□□□□□ -1.1
SMG1-213ENST00000567737 Q86TA4 180 aa8.19□□□□□ -1.1
SMG1-213ENST00000567737 SDHCQ99643 169 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms