RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 NUPR1O60356 82 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 GAGE7O76087 117 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 NPYP01303 97 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 NPSP0C0P6 89 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 GAGE12FP0CL80 117 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 GAGE12GP0CL81 117 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 GAGE12IP0CL82 117 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 S100A12P80511 92 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 PMCHL1Q16048 86 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 FAM222AQ5U5X8 452 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 UFSP1Q6NVU6 142 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 RNASEKQ6P5S7 137 aaKnown RBP7.04□□□□□ -1.28
SF3B3-207ENST00000566095 Q6ZTI0 123 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 URB1-AS1Q96HZ7 61 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 DKK2Q9UBU2 259 aa7.04□□□□□ -1.28
SF3B3-207ENST00000566095 TRGV4A0A0C4DH28 118 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 TRBV10-1A0A0K0K1A3 114 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 PLAC8L1A1L4L8 177 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 VCYO14598 125 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 LEPROTL1O95214 131 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 HBDP02042 147 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 ATP5G1P05496 136 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 DEFB130BP0DP73 79 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 DEFB130AP0DP74 79 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 FCER1GP30273 86 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
SF3B3-207ENST00000566095 DEFA6Q01524 100 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 CFAP126Q5VTH2 177 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 PET117Q6UWS5 81 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 LINC00612Q8N6U2 182 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 NBEAL1Q6ZS30 2694 aa7.03□□□□□ -1.28
SF3B3-207ENST00000566095 MUC4Q99102 2169 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 A0A087WWL8 130 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 IGHV1-24A0A0C4DH33 117 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 C20orf202A1L168 122 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 M0QY20 66 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 PRM2P04554 102 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
SF3B3-207ENST00000566095 LAGE3Q14657 143 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 RHOHQ15669 191 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 C12orf57Q99622 126 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 ST20Q9HBF5 79 aa7.02□□□□□ -1.29
SF3B3-207ENST00000566095 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 ATP5LO75964 103 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-207ENST00000566095 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 C11orf45Q8TAV5 145 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 MAP1LC3CQ9BXW4 147 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 RETNQ9HD89 108 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 TNFRSF18Q9Y5U5 241 aa7.01□□□□□ -1.29
SF3B3-207ENST00000566095 K7EQD1 137 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 CRYBA4P53673 196 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
SF3B3-207ENST00000566095 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 SH2D6Q7Z4S9 175 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
SF3B3-207ENST00000566095 PRO0255Q9UI72 69 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
SF3B3-207ENST00000566095 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 DEFB4AO15263 64 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 NCR2O95944 276 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 TMEM97Q5BJF2 176 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 JPT2Q9H910 190 aa6.99□□□□□ -1.29
SF3B3-207ENST00000566095 A0A096LNJ9 63 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 SDHAF1A6NFY7 115 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 SYS1-DBNDD2H3BUS1 97 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 C3orf79P0CE67 100 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 GATA1P15976 413 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-207ENST00000566095 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 FAM19A2Q8N3H0 131 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 ZNF479Q96JC4 524 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
SF3B3-207ENST00000566095 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 I3L3M4 83 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 PAX4O43316 350 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 LGALS9CQ6DKI2 356 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 DAZ4Q86SG3 579 aaKnown RBP6.97□□□□□ -1.29
SF3B3-207ENST00000566095 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
SF3B3-207ENST00000566095 DAZ3Q9NR90 486 aaKnown RBP6.97□□□□□ -1.29
SF3B3-207ENST00000566095 TRBV7-3A0A075B6L6 115 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 LOC389332A0A1B0GUA5 103 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 F5H768 121 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 SMKR1H3BMG3 65 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 H3BNG1 76 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 SCGB1D1O95968 90 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 ERASQ7Z444 233 aa6.96□□□□□ -1.3
SF3B3-207ENST00000566095 IFI27L1Q96BM0 104 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms