RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 LOC389332A0A1B0GUA5 103 aa13.3□□□□□ -0.28
COMMD4-213ENST00000565834 B9D2Q9BPU9 175 aa13.3□□□□□ -0.28
COMMD4-213ENST00000565834 TRGV4A0A0C4DH28 118 aa13.29□□□□□ -0.28
COMMD4-213ENST00000565834 PCP4L1A6NKN8 68 aa13.29□□□□□ -0.28
COMMD4-213ENST00000565834 SERF1AO75920 110 aa13.29□□□□□ -0.28
COMMD4-213ENST00000565834 SUMO2P61956 95 aaKnown RBP13.28□□□□□ -0.28
COMMD4-213ENST00000565834 PRSS3P2Q8NHM4 247 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 NIT2Q9NQR4 276 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 RNASEKQ6P5S7 137 aaKnown RBP13.28□□□□□ -0.28
COMMD4-213ENST00000565834 NIT1Q86X76 327 aa13.28□□□□□ -0.28
COMMD4-213ENST00000565834 P0DMU3 169 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 FAM231AP0DMU4 169 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 FAM231CP0DMU5 169 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 IFI27P40305 119 aaPredicted RBP13.27□□□□□ -0.29
COMMD4-213ENST00000565834 LINC00310P59036 64 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 DEFA6Q01524 100 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 FHL2Q14192 279 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.29
COMMD4-213ENST00000565834 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 PRSS47A8MTI9 375 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 K7EQD1 137 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 PMCHP20382 165 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 FA2HQ7L5A8 372 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 SMIM2Q9BVW6 85 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 NXT2Q9NPJ8 142 aaKnown RBP13.26□□□□□ -0.29
COMMD4-213ENST00000565834 FBN3Q75N90 2809 aa13.26□□□□□ -0.29
COMMD4-213ENST00000565834 LINC00614P0C842 121 aa13.25□□□□□ -0.29
COMMD4-213ENST00000565834 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
COMMD4-213ENST00000565834 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
COMMD4-213ENST00000565834 TRBV6-4A0A1B0GX49 114 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 NUPR1O60356 82 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 ATP5G1P05496 136 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 Q8N8P6 123 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
COMMD4-213ENST00000565834 TNFRSF18Q9Y5U5 241 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 TRBV10-1A0A0K0K1A3 114 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 PDZD11Q5EBL8 140 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 DNAJC30Q96LL9 226 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
COMMD4-213ENST00000565834 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
COMMD4-213ENST00000565834 ESDP10768 282 aa13.23□□□□□ -0.29
COMMD4-213ENST00000565834 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
COMMD4-213ENST00000565834 C12orf74Q32Q52 190 aa13.23□□□□□ -0.29
COMMD4-213ENST00000565834 AP5S1Q9NUS5 200 aa13.23□□□□□ -0.29
COMMD4-213ENST00000565834 Q9UF83 564 aa13.23□□□□□ -0.29
COMMD4-213ENST00000565834 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
COMMD4-213ENST00000565834 HSBP1O75506 76 aa13.22□□□□□ -0.29
COMMD4-213ENST00000565834 POLR2KP53803 58 aaKnown RBP13.22□□□□□ -0.29
COMMD4-213ENST00000565834 RHOHQ15669 191 aa13.22□□□□□ -0.29
COMMD4-213ENST00000565834 HHLA3Q9XRX5 114 aa13.22□□□□□ -0.29
COMMD4-213ENST00000565834 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
COMMD4-213ENST00000565834 PRADC1Q9BSG0 188 aa13.21□□□□□ -0.29
COMMD4-213ENST00000565834 IFITM10A6NMD0 228 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 VCYO14598 125 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 RPL36AP83881 106 aaKnown RBP13.21□□□□□ -0.3
COMMD4-213ENST00000565834 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 RPL36ALQ969Q0 106 aaKnown RBP13.21□□□□□ -0.3
COMMD4-213ENST00000565834 PRO0255Q9UI72 69 aa13.21□□□□□ -0.3
COMMD4-213ENST00000565834 TRBV27A0A0K0K1C4 114 aa13.2□□□□□ -0.3
COMMD4-213ENST00000565834 HTN3P15516 51 aa13.2□□□□□ -0.3
COMMD4-213ENST00000565834 DNAH9Q9NYC9 4486 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 TRBV7-3A0A075B6L6 115 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 LINC01546A6NGU7 62 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 F5H768 121 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 CRYBA4P53673 196 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
COMMD4-213ENST00000565834 PACRGQ96M98 296 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-213ENST00000565834 TCAPO15273 167 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 NHLRC4P0CG21 123 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-213ENST00000565834 KIR2DL4Q99706 377 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 COL7A1Q02388 2944 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 LOC100131303A0A0U1RQF7 123 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 GAGE12JA6NER3 117 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 I3L3M4 83 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 FABP4P15090 132 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 AMTP48728 403 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
COMMD4-213ENST00000565834 GAGE1Q13065 139 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 GAGE4Q13068 117 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 GAGE5Q13069 117 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 GAGE13Q4V321 117 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 PYY3Q5JQD4 70 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 Q6ZTC4 211 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 FAM19A2Q8N3H0 131 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 TMEM18Q96B42 140 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 HIST1H2BLQ99880 126 aa13.18□□□□□ -0.3
COMMD4-213ENST00000565834 K7EMI3 77 aa13.17□□□□□ -0.3
COMMD4-213ENST00000565834 PAX4O43316 350 aa13.17□□□□□ -0.3
COMMD4-213ENST00000565834 LAGE3Q14657 143 aa13.17□□□□□ -0.3
COMMD4-213ENST00000565834 PMCHL1Q16048 86 aa13.17□□□□□ -0.3
COMMD4-213ENST00000565834 IGHV1-24A0A0C4DH33 117 aa13.16□□□□□ -0.3
COMMD4-213ENST00000565834 FCER1GP30273 86 aa13.15□□□□□ -0.3
COMMD4-213ENST00000565834 UBE2D3P61077 147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms