RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-229	ENST00000565580	LECT2	O14960	151 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	ARPC5	O15511	151 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	DNLZ	Q5SXM8	178 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	FAM74A4	Q5TZK3	123 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	TMUB2	Q71RG4	321 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	COX8C	Q7Z4L0	72 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	TMEM70	Q9BUB7	260 aa		4.21	□□□□□ -1.74
TCF4-229	ENST00000565580	TRBV6-1	A0A0K0K1D8	114 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	KRTAP23-1	A1A580	65 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580		M0R381	172 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	RHOD	O00212	210 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	LTA	P01374	205 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	UBE2G1	P62253	170 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	ZNF674	Q2M3X9	581 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	FAM162B	Q5T6X4	162 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	EIF5AL1	Q6IS14	154 aa	Known RBP	4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	STOML3	Q8TAV4	291 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	BAALC	Q8WXS3	180 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	SFRP2	Q96HF1	295 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	FMC1	Q96HJ9	113 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	TM2D2	Q9BX73	214 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	NKX6-2	Q9C056	277 aa	Predicted RBP	4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	ZFP30	Q9Y2G7	519 aa		4.2	□□□□□ -1.74
TCF4-229	ENST00000565580	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-229	ENST00000565580		A0A087WWC5	75 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	TRAV8-3	A0A0A6YYJ7	113 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580		A0A1B0GV50	99 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	KANTR	A0A1W2PQU2	76 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	BCL2L11	O43521	198 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	PAGE4	O60829	102 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	TPT1	P13693	172 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	AKR1C3	P42330	323 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	RPL19	P84098	196 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	LINC01620	Q4KN68	170 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	CST9LP1	Q5W188	147 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580		Q6ZSA8	131 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	NIT1	Q86X76	327 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	PHLDA3	Q9Y5J5	127 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	UBR4	Q5T4S7	5183 aa		4.19	□□□□□ -1.74
TCF4-229	ENST00000565580	UBE2D3	P61077	147 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	UBE2D2	P62837	147 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	SLC7A5P1	Q8MH63	180 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	ZFP82	Q8N141	532 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	OR10AG1	Q8NH19	301 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	TCEAL7	Q9BRU2	100 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	KLK12	Q9UKR0	248 aa		4.18	□□□□□ -1.74
TCF4-229	ENST00000565580	IGKV2D-24	A0A075B6R9	120 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	MUC21	A0A0G2JKD1	596 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	TRBV10-1	A0A0K0K1A3	114 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	MUC21	A0A140T8X8	626 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	RAB19	A4D1S5	217 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	TEX46	H3BTG2	121 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	SEC11B	P0C7V7	166 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	RPL36A	P83881	106 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	PRR27	Q6MZM9	219 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	UQCC3	Q6UW78	93 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	NEXN-AS1	Q8NBZ9	246 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	OR10G8	Q8NGN5	311 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	FAM213B	Q8TBF2	198 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	SFT2D1	Q8WV19	159 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	MBD3L1	Q8WWY6	194 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	RPL36AL	Q969Q0	106 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	UBE2W	Q96B02	151 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	MLST8	Q9BVC4	326 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	URGCP-MRPS24	S4R325	110 aa		4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	LRP1	Q07954	4544 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-229	ENST00000565580	TRBV7-3	A0A075B6L6	115 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580		A0A087WX48	190 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	RBFOX3	A6NFN3	312 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580		F5H697	171 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	SNAI2	O43623	268 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	CXCL1	P09341	107 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	RAB5C	P51148	216 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	SST	P61278	116 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	ZNF56	Q15929	161 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	ATRAID	Q6UW56	229 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	ENHO	Q6UWT2	76 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	SCX	Q7RTU7	201 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	BAGE2	Q86Y30	109 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	RMI2	Q96E14	147 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	ZNF471	Q9BX82	626 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	COX11	Q9Y6N1	276 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	FAT3	Q8TDW7	4589 aa		4.16	□□□□□ -1.74
TCF4-229	ENST00000565580	TRBV6-8	A0A0A6YYG3	113 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	UMAD1	C9J7I0	102 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	TMEM262	E9PQX1	116 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	S100A9	P06702	114 aa	Known RBP	4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	RAB4B	P61018	213 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	BLOC1S1	P78537	153 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	CCL20	P78556	96 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	MPV17L2	Q567V2	206 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	NTM-AS1	Q6ZSK4	140 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	C15orf54	Q8N8G6	183 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580		Q8N976	141 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	CHCHD7	Q9BUK0	85 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	DERL1	Q9BUN8	251 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	SMDT1	Q9H4I9	107 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	KIF25-AS1	Q9Y6Z4	181 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	PKHD1L1	Q86WI1	4243 aa		4.15	□□□□□ -1.75
TCF4-229	ENST00000565580	HMCN2	Q8NDA2	5059 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms