RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 GAGE5Q13069 117 aa12.96□□□□□ -0.33
FANCA-212ENST00000563513 GAGE13Q4V321 117 aa12.96□□□□□ -0.33
FANCA-212ENST00000563513 RASL11AQ6T310 242 aa12.96□□□□□ -0.33
FANCA-212ENST00000563513 ALMS1Q8TCU4 4167 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 ATP6V1G1O75348 118 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 MRPL51Q4U2R6 128 aaKnown RBP12.95□□□□□ -0.34
FANCA-212ENST00000563513 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 CBLN2Q8IUK8 224 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 LYSTQ99698 3801 aa12.95□□□□□ -0.34
FANCA-212ENST00000563513 TRBV24-1A0A075B6N3 115 aa12.94□□□□□ -0.34
FANCA-212ENST00000563513 FRZBQ92765 325 aa12.94□□□□□ -0.34
FANCA-212ENST00000563513 SMCO4Q9NRQ5 59 aa12.94□□□□□ -0.34
FANCA-212ENST00000563513 TRBV7-3A0A075B6L6 115 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 SMKR1H3BMG3 65 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 H7C1H1 209 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 SRIP30626 198 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 ESRGQ1W209 222 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
FANCA-212ENST00000563513 NIT2Q9NQR4 276 aa12.93□□□□□ -0.34
FANCA-212ENST00000563513 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
FANCA-212ENST00000563513 UBE2D3P61077 147 aa12.92□□□□□ -0.34
FANCA-212ENST00000563513 UBE2D2P62837 147 aa12.92□□□□□ -0.34
FANCA-212ENST00000563513 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
FANCA-212ENST00000563513 NEGR1Q7Z3B1 354 aa12.92□□□□□ -0.34
FANCA-212ENST00000563513 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
FANCA-212ENST00000563513 SCO1O75880 301 aa12.91□□□□□ -0.34
FANCA-212ENST00000563513 RPL36AP83881 106 aaKnown RBP12.91□□□□□ -0.34
FANCA-212ENST00000563513 RPL36ALQ969Q0 106 aaKnown RBP12.91□□□□□ -0.34
FANCA-212ENST00000563513 DNAJC30Q96LL9 226 aa12.91□□□□□ -0.34
FANCA-212ENST00000563513 NCR2O95944 276 aa12.9□□□□□ -0.34
FANCA-212ENST00000563513 S100A1P23297 94 aa12.9□□□□□ -0.34
FANCA-212ENST00000563513 NRACQ8N912 160 aa12.9□□□□□ -0.34
FANCA-212ENST00000563513 ATP6V0E2Q8NHE4 81 aa12.9□□□□□ -0.34
FANCA-212ENST00000563513 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
FANCA-212ENST00000563513 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
FANCA-212ENST00000563513 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
FANCA-212ENST00000563513 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
FANCA-212ENST00000563513 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
FANCA-212ENST00000563513 CKS2P33552 79 aa12.88□□□□□ -0.35
FANCA-212ENST00000563513 IGHV3-38A0A0C4DH36 116 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 D6R8Y8 96 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 COX19Q49B96 90 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
FANCA-212ENST00000563513 KMT2CQ8NEZ4 4911 aaKnown RBP12.86□□□□□ -0.35
FANCA-212ENST00000563513 HLA-DQA1P01909 254 aa12.86□□□□□ -0.35
FANCA-212ENST00000563513 TIRAPP58753 221 aa12.86□□□□□ -0.35
FANCA-212ENST00000563513 COLCA2A8K830 154 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 APCSP02743 223 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 PPBPP02775 128 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 POLR2KP53803 58 aaKnown RBP12.85□□□□□ -0.35
FANCA-212ENST00000563513 CCL18P55774 89 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 DAZ4Q86SG3 579 aaKnown RBP12.85□□□□□ -0.35
FANCA-212ENST00000563513 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 DAZ3Q9NR90 486 aaKnown RBP12.85□□□□□ -0.35
FANCA-212ENST00000563513 HYDINQ4G0P3 5121 aa12.85□□□□□ -0.35
FANCA-212ENST00000563513 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 NPYP01303 97 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 KIAA1644Q3SXP7 199 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 NTM-AS1Q6ZSK4 140 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 MRPL18Q9H0U6 180 aaKnown RBP12.84□□□□□ -0.35
FANCA-212ENST00000563513 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
FANCA-212ENST00000563513 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
FANCA-212ENST00000563513 MT-ND6P03923 174 aa12.83□□□□□ -0.36
FANCA-212ENST00000563513 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
FANCA-212ENST00000563513 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
FANCA-212ENST00000563513 ST20Q9HBF5 79 aa12.83□□□□□ -0.36
FANCA-212ENST00000563513 PPP1R17O96001 155 aa12.82□□□□□ -0.36
FANCA-212ENST00000563513 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
FANCA-212ENST00000563513 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
FANCA-212ENST00000563513 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
FANCA-212ENST00000563513 PHOX2AO14813 284 aa12.81□□□□□ -0.36
FANCA-212ENST00000563513 FABP9Q0Z7S8 132 aa12.81□□□□□ -0.36
FANCA-212ENST00000563513 LELP1Q5T871 98 aa12.81□□□□□ -0.36
FANCA-212ENST00000563513 C20orf78Q9BR46 151 aa12.81□□□□□ -0.36
FANCA-212ENST00000563513 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
FANCA-212ENST00000563513 KMT2AQ03164 3969 aa12.8□□□□□ -0.36
FANCA-212ENST00000563513 TRBV27A0A0K0K1C4 114 aa12.8□□□□□ -0.36
FANCA-212ENST00000563513 LY6G6CO95867 125 aa12.8□□□□□ -0.36
FANCA-212ENST00000563513 UBE2DNLQ8IWF7 75 aa12.8□□□□□ -0.36
FANCA-212ENST00000563513 TRBV6-8A0A0A6YYG3 113 aa12.79□□□□□ -0.36
FANCA-212ENST00000563513 LCE6AA0A183 80 aa12.79□□□□□ -0.36
FANCA-212ENST00000563513 PRSS47A8MTI9 375 aa12.79□□□□□ -0.36
FANCA-212ENST00000563513 RPL32P62910 135 aaKnown RBP12.79□□□□□ -0.36
FANCA-212ENST00000563513 ALKBH7Q9BT30 221 aaPredicted RBP12.79□□□□□ -0.36
FANCA-212ENST00000563513 LAMTOR2Q9Y2Q5 125 aa12.79□□□□□ -0.36
FANCA-212ENST00000563513 RYR2Q92736 4967 aa12.79□□□□□ -0.36
FANCA-212ENST00000563513 I3L3M4 83 aa12.78□□□□□ -0.36
FANCA-212ENST00000563513 VCYO14598 125 aa12.78□□□□□ -0.36
FANCA-212ENST00000563513 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
FANCA-212ENST00000563513 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.37
FANCA-212ENST00000563513 TSHBP01222 138 aa12.77□□□□□ -0.37
FANCA-212ENST00000563513 PMCHP20382 165 aa12.77□□□□□ -0.37
FANCA-212ENST00000563513 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.77□□□□□ -0.37
FANCA-212ENST00000563513 Q9H8V8 135 aa12.77□□□□□ -0.37
FANCA-212ENST00000563513 RAB5AP20339 215 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms