RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 CRYGDP07320 174 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 SRIP30626 198 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 BAGE3Q86Y29 109 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
LDLR-212ENST00000560467 IGHV3-73A0A0B4J1V6 119 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 IGLL5B9A064 214 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 ATP5G1P05496 136 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 C18orf15Q96N68 181 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
LDLR-212ENST00000560467 JPT2Q9H910 190 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
LDLR-212ENST00000560467 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
LDLR-212ENST00000560467 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 PMCHP20382 165 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 SAMD10Q9BYL1 202 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
LDLR-212ENST00000560467 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 SUMO4Q6EEV6 95 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 POM121L12Q8N7R1 296 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 DNAJC30Q96LL9 226 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 NIT2Q9NQR4 276 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
LDLR-212ENST00000560467 ABCA13Q86UQ4 5058 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 TRBV6-4A0A1B0GX49 114 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 F5H768 121 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 VCYO14598 125 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 TCAPO15273 167 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 NCR2O95944 276 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 HTN3P15516 51 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 G0S2P27469 103 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 NDUFA6P56556 154 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 TCTAP57738 103 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 RPL36AP83881 106 aaKnown RBP8.31□□□□□ -1.08
LDLR-212ENST00000560467 Q0VG73 95 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 RHOHQ15669 191 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 RPL36ALQ969Q0 106 aaKnown RBP8.31□□□□□ -1.08
LDLR-212ENST00000560467 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
LDLR-212ENST00000560467 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
LDLR-212ENST00000560467 LOC389332A0A1B0GUA5 103 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 SMKR1H3BMG3 65 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 M0QY20 66 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 LINC00315P59091 139 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 SUMO2P61956 95 aaKnown RBP8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 PRO0255Q9UI72 69 aa8.3□□□□□ -1.08
LDLR-212ENST00000560467 K7EQD1 137 aa8.29□□□□□ -1.08
LDLR-212ENST00000560467 PAX4O43316 350 aa8.29□□□□□ -1.08
LDLR-212ENST00000560467 UFSP1Q6NVU6 142 aa8.29□□□□□ -1.08
LDLR-212ENST00000560467 Q6ZTC4 211 aa8.29□□□□□ -1.08
LDLR-212ENST00000560467 LINC00336Q6ZUF6 198 aa8.29□□□□□ -1.08
LDLR-212ENST00000560467 TRBV6-5A0A0K0K1A5 114 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 K7EMI3 77 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 NPYP01303 97 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
LDLR-212ENST00000560467 S100A2P29034 98 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 FCER1GP30273 86 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 RNASEKQ6P5S7 137 aaKnown RBP8.28□□□□□ -1.08
LDLR-212ENST00000560467 SH2D6Q7Z4S9 175 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 C18orf32Q8TCD1 76 aa8.28□□□□□ -1.08
LDLR-212ENST00000560467 CHCHD1Q96BP2 118 aaKnown RBP8.28□□□□□ -1.08
LDLR-212ENST00000560467 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 I3L3M4 83 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 HSBP1O75506 76 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 LINC00614P0C842 121 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 FHL2Q14192 279 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 Q8N8P6 123 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 CELA1Q9UNI1 258 aa8.27□□□□□ -1.09
LDLR-212ENST00000560467 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
LDLR-212ENST00000560467 RTL8CO15255 209 aa8.26□□□□□ -1.09
LDLR-212ENST00000560467 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
LDLR-212ENST00000560467 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms