RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
RPL28-209ENST00000560055 DNAH11Q96DT5 4516 aa11.46□□□□□ -0.58
RPL28-209ENST00000560055 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
RPL28-209ENST00000560055 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
RPL28-209ENST00000560055 TMEM218A2RU14 115 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 H7C1H1 209 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 C1orf134Q5TEV5 83 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 PKD1P98161 4303 aa11.44□□□□□ -0.58
RPL28-209ENST00000560055 A0A087WWC5 75 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 IGHV3-38A0A0C4DH36 116 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 K7EP13 123 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 LINC01556Q5JQF7 62 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 DNAJC30Q96LL9 226 aa11.43□□□□□ -0.58
RPL28-209ENST00000560055 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
RPL28-209ENST00000560055 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
RPL28-209ENST00000560055 TMEM191AQ9H0A3 160 aa11.42□□□□□ -0.58
RPL28-209ENST00000560055 PPP1R2P9O14990 202 aa11.41□□□□□ -0.58
RPL28-209ENST00000560055 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
RPL28-209ENST00000560055 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
RPL28-209ENST00000560055 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
RPL28-209ENST00000560055 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
RPL28-209ENST00000560055 HERC2O95714 4834 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 RIGQ13278 110 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 FRZBQ92765 325 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 NIT2Q9NQR4 276 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.58
RPL28-209ENST00000560055 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
RPL28-209ENST00000560055 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
RPL28-209ENST00000560055 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
RPL28-209ENST00000560055 SEC11CQ9BY50 192 aa11.39□□□□□ -0.59
RPL28-209ENST00000560055 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
RPL28-209ENST00000560055 F8W036 122 aa11.38□□□□□ -0.59
RPL28-209ENST00000560055 MT-ND4LP03901 98 aa11.38□□□□□ -0.59
RPL28-209ENST00000560055 RAB4AP20338 218 aa11.37□□□□□ -0.59
RPL28-209ENST00000560055 C10orf91Q5T1B1 145 aa11.37□□□□□ -0.59
RPL28-209ENST00000560055 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
RPL28-209ENST00000560055 Q8N3U1 123 aa11.37□□□□□ -0.59
RPL28-209ENST00000560055 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
RPL28-209ENST00000560055 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
RPL28-209ENST00000560055 DYNC1H1Q14204 4646 aaKnown RBP11.36□□□□□ -0.59
RPL28-209ENST00000560055 A0A1B0GW15 77 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 A0A1B0GXF2 115 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 PRSS29PA6NIE9 313 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 Q6ZRN7 208 aaPredicted RBP11.36□□□□□ -0.59
RPL28-209ENST00000560055 NIT1Q86X76 327 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
RPL28-209ENST00000560055 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
RPL28-209ENST00000560055 GAS8-AS1O95177 125 aa11.35□□□□□ -0.59
RPL28-209ENST00000560055 IGHV3-30P01768 117 aa11.35□□□□□ -0.59
RPL28-209ENST00000560055 IGHV3-33P01772 117 aa11.35□□□□□ -0.59
RPL28-209ENST00000560055 IGHV3-30-3P0DP02 117 aa11.35□□□□□ -0.59
RPL28-209ENST00000560055 IGHV3-30-5P0DP03 117 aa11.35□□□□□ -0.59
RPL28-209ENST00000560055 TRBV6-5A0A0K0K1A5 114 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 IBA57-AS1B1ANH7 110 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 CAMPP49913 170 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
RPL28-209ENST00000560055 ATP5L2Q7Z4Y8 100 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
RPL28-209ENST00000560055 HBBP68871 147 aa11.33□□□□□ -0.6
RPL28-209ENST00000560055 IQCJQ1A5X6 159 aa11.33□□□□□ -0.6
RPL28-209ENST00000560055 FAM104BQ5XKR9 115 aa11.33□□□□□ -0.6
RPL28-209ENST00000560055 CHCHD7Q9BUK0 85 aa11.33□□□□□ -0.6
RPL28-209ENST00000560055 CARHSP1Q9Y2V2 147 aaKnown RBP11.33□□□□□ -0.6
RPL28-209ENST00000560055 DNAH5Q8TE73 4624 aa11.32□□□□□ -0.6
RPL28-209ENST00000560055 S100A8P05109 93 aa11.32□□□□□ -0.6
RPL28-209ENST00000560055 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
RPL28-209ENST00000560055 TNP2Q05952 138 aa11.32□□□□□ -0.6
RPL28-209ENST00000560055 LAGE3Q14657 143 aa11.32□□□□□ -0.6
RPL28-209ENST00000560055 NFE4Q86UQ8 179 aa11.32□□□□□ -0.6
RPL28-209ENST00000560055 TRBV25-1A0A075B6N4 114 aa11.31□□□□□ -0.6
RPL28-209ENST00000560055 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
RPL28-209ENST00000560055 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
RPL28-209ENST00000560055 IGHV1-24A0A0C4DH33 117 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
RPL28-209ENST00000560055 NRACQ8N912 160 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 CHCHD5Q9BSY4 110 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 KRTAP17-1Q9BYP8 105 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 CTDSP1Q9GZU7 261 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 URGCP-MRPS24S4R325 110 aa11.3□□□□□ -0.6
RPL28-209ENST00000560055 A0A087WX48 190 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 NCR2O95944 276 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 PKIAP61925 76 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 COTL1Q14019 142 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
RPL28-209ENST00000560055 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms