RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 DYNC2H1Q8NCM8 4307 aaKnown RBP6.53□□□□□ -1.36
HERC1-206ENST00000559996 DEFB131BA0A096LNP1 70 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 TRGV4A0A0C4DH28 118 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 F5H768 121 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 S100A8P05109 93 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 MGPP08493 103 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 COX19Q49B96 90 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 PHLDA1Q8WV24 401 aaPredicted RBP6.53□□□□□ -1.36
HERC1-206ENST00000559996 RPL39LQ96EH5 51 aaKnown RBP6.53□□□□□ -1.36
HERC1-206ENST00000559996 PRO0255Q9UI72 69 aa6.53□□□□□ -1.36
HERC1-206ENST00000559996 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 D6R8Y8 96 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 K7EQD1 137 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 NCR2O95944 276 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 APCSP02743 223 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 TRGC2P03986 189 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 SMIM17P0DL12 118 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 FABP9Q0Z7S8 132 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 ZNF56Q15929 161 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 SMIM15Q7Z3B0 74 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 MRAP2Q96G30 205 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
HERC1-206ENST00000559996 TRAPPC1Q9Y5R8 145 aa6.52□□□□□ -1.37
HERC1-206ENST00000559996 A0A096LPF7 62 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 A0A0J9YY99 117 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 F5H697 171 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 H3BNG1 76 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 NPYP01303 97 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 MT-ND6P03923 174 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 HTN3P15516 51 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 POLR2KP53803 58 aaKnown RBP6.51□□□□□ -1.37
HERC1-206ENST00000559996 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
HERC1-206ENST00000559996 IGLV2-18A0A075B6J9 118 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 TRBV10-1A0A0K0K1A3 114 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 CEMP1Q6PRD7 247 aaPredicted RBP6.5□□□□□ -1.37
HERC1-206ENST00000559996 ZNRF2Q8NHG8 242 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 APLNQ9ULZ1 77 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
HERC1-206ENST00000559996 TRBV7-3A0A075B6L6 115 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 PPBPP02775 128 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 GYPEP15421 78 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 CKS2P33552 79 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 UBE2D3P61077 147 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 UBE2D2P62837 147 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 RHOHQ15669 191 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 ORMDL3Q8N138 153 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 URB1-AS1Q96HZ7 61 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 DNAJC30Q96LL9 226 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 PRELID3AQ96N28 172 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
HERC1-206ENST00000559996 GAGE12JA6NER3 117 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
HERC1-206ENST00000559996 GAGE1Q13065 139 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 GAGE4Q13068 117 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 GAGE5Q13069 117 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 NTM-AS1Q6ZSK4 140 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
HERC1-206ENST00000559996 TRBV27A0A0K0K1C4 114 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 IGLL5B9A064 214 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 H7C1H1 209 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 SRIP30626 198 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 OR10J3Q5JRS4 329 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 MUC7Q8TAX7 377 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 LAMTOR2Q9Y2Q5 125 aa6.47□□□□□ -1.37
HERC1-206ENST00000559996 IGHV3-38A0A0C4DH36 116 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BKO60814 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BJP06899 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BOP23527 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BBP33778 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BDP58876 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 LINC00310P59036 64 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 SUMO2P61956 95 aaKnown RBP6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BCP62807 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 RPL36AP83881 106 aaKnown RBP6.46□□□□□ -1.38
HERC1-206ENST00000559996 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST2H2BEQ16778 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 IQCJQ1A5X6 159 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 ESRGQ1W209 222 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.46□□□□□ -1.38
HERC1-206ENST00000559996 CDPF1Q6NVV7 123 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 LYPD5Q6UWN5 251 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 DEFB104AQ8WTQ1 72 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BHQ93079 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 RPL36ALQ969Q0 106 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms