RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ODF1Q14990 250 aa10.7□□□□□ -0.7
CSPG4P12-202ENST00000559989 LINC00173Q6ZV60 143 aa10.7□□□□□ -0.7
CSPG4P12-202ENST00000559989 PRYO14603 147 aa10.7□□□□□ -0.7
CSPG4P12-202ENST00000559989 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
CSPG4P12-202ENST00000559989 C7orf33Q8WU49 177 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 PLXNA4Q9HCM2 1894 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 Q6ZVQ6 151 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 IGKV2-24A0A0C4DH68 120 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 CDPF1Q6NVV7 123 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 SPRY2O43597 315 aa10.69□□□□□ -0.7
CSPG4P12-202ENST00000559989 LRRC75A-AS1Q8N1F1 130 aa10.68□□□□□ -0.7
CSPG4P12-202ENST00000559989 WFDC10AQ9H1F0 79 aa10.68□□□□□ -0.7
CSPG4P12-202ENST00000559989 HCFC1P51610 2035 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 H7C423 109 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 CRIPAKQ8N1N5 446 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 IGHV4-31P0DP07 118 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
CSPG4P12-202ENST00000559989 UBE2D3P61077 147 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 CTRLP40313 264 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 A0A096LNI7 61 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 SMIM26A0A096LP01 95 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 WT1P19544 449 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 NCOA6Q14686 2063 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 DENND4CQ5VZ89 1909 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 MGAMO43451 1857 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 NUP210Q8TEM1 1887 aaPredicted RBP10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
CSPG4P12-202ENST00000559989 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 FREM1Q5H8C1 2179 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 UBE2D2P62837 147 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 TNCP24821 2201 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 CCKP06307 115 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 SPRY4Q9C004 299 aa10.65□□□□□ -0.7
CSPG4P12-202ENST00000559989 A0A0J9YXY3 114 aa10.65□□□□□ -0.71
CSPG4P12-202ENST00000559989 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.71
CSPG4P12-202ENST00000559989 DIAPH2-AS1Q14236 149 aa10.64□□□□□ -0.71
CSPG4P12-202ENST00000559989 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
CSPG4P12-202ENST00000559989 C3orf84H3BNL1 204 aa10.64□□□□□ -0.71
CSPG4P12-202ENST00000559989 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 AJUBAQ96IF1 538 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 P0DMU3 169 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 FAM231AP0DMU4 169 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 K7ENP7 123 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 CRYGDP07320 174 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 PLCE1Q9P212 2302 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 SIP14410 1827 aa10.63□□□□□ -0.71
CSPG4P12-202ENST00000559989 REG3AQ06141 175 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 Q6ZR03 302 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 J3QKU1 62 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 COX7CP15954 63 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 MSRB1Q9NZV6 116 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 I3L2K1 104 aa10.62□□□□□ -0.71
CSPG4P12-202ENST00000559989 SLPIP03973 132 aa10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 DHRS4-AS1Q9P1J3 65 aa10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 K7EMT4 169 aa10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 ZNF106Q9H2Y7 1883 aaKnown RBP10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 SPINK6Q6UWN8 80 aa10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 C11orf45Q8TAV5 145 aa10.61□□□□□ -0.71
CSPG4P12-202ENST00000559989 CEP290O15078 2479 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 KIF26AQ9ULI4 1882 aaPredicted RBP10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 WFDC13Q8IUB5 93 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 SPATA12Q7Z6I5 190 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 IGLV1-44P01699 117 aa10.6□□□□□ -0.71
CSPG4P12-202ENST00000559989 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 SHANK1Q9Y566 2161 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 IGHV4-61A0A0C4DH41 118 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 NUPR1O60356 82 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 MIFP14174 115 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 CACNA1BQ00975 2339 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 C20orf203Q8NBC4 194 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 TNS1Q9HBL0 1735 aaKnown RBP10.59□□□□□ -0.71
CSPG4P12-202ENST00000559989 EP300Q09472 2414 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 INSL3P51460 131 aa10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 FAM19A5Q7Z5A7 132 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 C5orf56Q8N8D9 126 aa10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 MYCNOSP40205 109 aa10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 IGHV7-81A0A0B4J1V7 117 aa10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
CSPG4P12-202ENST00000559989 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms