RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 H3BRM9 83 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 EVI2AP22794 236 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 ODF1Q14990 250 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 NRACQ8N912 160 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 HIGD1BQ9P298 99 aa7.51□□□□□ -1.21
TPM1-212ENST00000558347 ZNF688P0C7X2 276 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 RPL35AP18077 110 aaKnown RBP7.5□□□□□ -1.21
TPM1-212ENST00000558347 APOC4P55056 127 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 LAGE3Q14657 143 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 DEFB135Q30KP9 77 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 Q6ZVH6 145 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 FAM19A4Q96LR4 140 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 MAP6D1Q9H9H5 199 aa7.5□□□□□ -1.21
TPM1-212ENST00000558347 LCE6AA0A183 80 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 M0R381 172 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 DPM2O94777 84 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 IGKCP01834 107 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 CMC4P56277 68 aaPredicted RBP7.49□□□□□ -1.21
TPM1-212ENST00000558347 ZFAND2AQ8N6M9 145 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 C20orf78Q9BR46 151 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 DKK2Q9UBU2 259 aa7.49□□□□□ -1.21
TPM1-212ENST00000558347 A0A0J9YX75 114 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 C7orf71A4D174 169 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 CBY3A6NI87 242 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 SPRY2O43597 315 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 PPP1R17O96001 155 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 PRSS1P07477 247 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 FOXI2Q6ZQN5 318 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 KIR2DL5BQ8NHK3 375 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 TP53TG1Q9Y2A0 90 aa7.48□□□□□ -1.21
TPM1-212ENST00000558347 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 A8MTW9 85 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 ASIPP42127 132 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 FXYD7P58549 80 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 RNF183Q96D59 192 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 ODF3Q96PU9 254 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 DPH3P1Q9H4G8 78 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 F6UB75 175 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 H3BVH4 76 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
TPM1-212ENST00000558347 GATA1P15976 413 aaPredicted RBP7.47□□□□□ -1.21
TPM1-212ENST00000558347 PLNP26678 52 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 DEFB131AP59861 70 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 DEFB1P60022 68 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 PRR9Q5T870 116 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 AMMECR1LQ6DCA0 310 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 GTF2H5Q6ZYL4 71 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 C18orf15Q96N68 181 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 AP1S3Q96PC3 154 aa7.47□□□□□ -1.21
TPM1-212ENST00000558347 A0A087WX48 190 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 LINC01549A6NIU2 74 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 NXPH4O95158 308 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 NMUP48645 174 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
TPM1-212ENST00000558347 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 CSTL1Q9H114 145 aa7.46□□□□□ -1.22
TPM1-212ENST00000558347 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
TPM1-212ENST00000558347 S100A4P26447 101 aaKnown RBP7.45□□□□□ -1.22
TPM1-212ENST00000558347 CDKN1BP46527 198 aa7.45□□□□□ -1.22
TPM1-212ENST00000558347 TAL2Q16559 108 aa7.45□□□□□ -1.22
TPM1-212ENST00000558347 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
TPM1-212ENST00000558347 KMT2AQ03164 3969 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 H3BMM0 161 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
TPM1-212ENST00000558347 H7C1H1 209 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 SUMO2P61956 95 aaKnown RBP7.44□□□□□ -1.22
TPM1-212ENST00000558347 RBX1P62877 108 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 UFSP1Q6NVU6 142 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 RNASE8Q8TDE3 154 aaKnown RBP7.44□□□□□ -1.22
TPM1-212ENST00000558347 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
TPM1-212ENST00000558347 AGRNO00468 2067 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 GAGE10A6NGK3 116 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 KNCNA6PVL3 124 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 KLLNB2CW77 178 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 ANXA2RQ3ZCQ2 193 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 ZC2HC1BQ5TFG8 222 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 AMTNQ6UX39 209 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 RASL10AQ92737 203 aa7.43□□□□□ -1.22
TPM1-212ENST00000558347 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 F8VRH5 84 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 K7EP34 96 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 SMIM13P0DJ93 91 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 STHQ8IWL8 128 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 OR5A1Q8NGJ0 315 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
TPM1-212ENST00000558347 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms