RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 VPS13DQ5THJ4 4388 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 PPP1R17O96001 155 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 UBE2D3P61077 147 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 UBE2D2P62837 147 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
SHMT2-234ENST00000557703 RYR3Q15413 4870 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 MGPP08493 103 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 PKIAP61925 76 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 GAGE1Q13065 139 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 GAGE4Q13068 117 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 GAGE5Q13069 117 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 GAGE13Q4V321 117 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 Q6ZR54 194 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
SHMT2-234ENST00000557703 TNFRSF18Q9Y5U5 241 aa9.4□□□□□ -0.9
SHMT2-234ENST00000557703 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 ADCYAP1P18509 176 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
SHMT2-234ENST00000557703 HBBP68871 147 aa9.38□□□□□ -0.91
SHMT2-234ENST00000557703 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
SHMT2-234ENST00000557703 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
SHMT2-234ENST00000557703 CHCHD7Q9BUK0 85 aa9.38□□□□□ -0.91
SHMT2-234ENST00000557703 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
SHMT2-234ENST00000557703 RHEBQ15382 184 aa9.37□□□□□ -0.91
SHMT2-234ENST00000557703 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
SHMT2-234ENST00000557703 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
SHMT2-234ENST00000557703 BTF3L4Q96K17 158 aa9.37□□□□□ -0.91
SHMT2-234ENST00000557703 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
SHMT2-234ENST00000557703 LINC00336Q6ZUF6 198 aa9.36□□□□□ -0.91
SHMT2-234ENST00000557703 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
SHMT2-234ENST00000557703 Q9UF83 564 aa9.36□□□□□ -0.91
SHMT2-234ENST00000557703 DNAH6Q9C0G6 4158 aa9.36□□□□□ -0.91
SHMT2-234ENST00000557703 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 PPBPP02775 128 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 RAB4AP20338 218 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 SVBPQ8N300 66 aa9.35□□□□□ -0.91
SHMT2-234ENST00000557703 SNAPINO95295 136 aa9.34□□□□□ -0.91
SHMT2-234ENST00000557703 NCR2O95944 276 aa9.34□□□□□ -0.91
SHMT2-234ENST00000557703 S100PP25815 95 aa9.34□□□□□ -0.91
SHMT2-234ENST00000557703 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
SHMT2-234ENST00000557703 NFE4Q86UQ8 179 aa9.34□□□□□ -0.91
SHMT2-234ENST00000557703 IGLV2-18A0A075B6J9 118 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 LAGE3Q14657 143 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 ELOBQ15370 118 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 COX19Q49B96 90 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
SHMT2-234ENST00000557703 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 PHOX2AO14813 284 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 TCAPO15273 167 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 CAMPP49913 170 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 COTL1Q14019 142 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 WFDC10BQ8IUB3 73 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 C6orf223Q8N319 242 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 CLRN3Q8NCR9 226 aa9.32□□□□□ -0.92
SHMT2-234ENST00000557703 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 M0R2N4 97 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
SHMT2-234ENST00000557703 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
SHMT2-234ENST00000557703 NIT1Q86X76 327 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 LAMTOR2Q9Y2Q5 125 aa9.31□□□□□ -0.92
SHMT2-234ENST00000557703 A0A087WX48 190 aa9.3□□□□□ -0.92
SHMT2-234ENST00000557703 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
SHMT2-234ENST00000557703 SDHAF1A6NFY7 115 aa9.3□□□□□ -0.92
SHMT2-234ENST00000557703 H7C423 109 aa9.3□□□□□ -0.92
SHMT2-234ENST00000557703 APOC3P02656 99 aa9.3□□□□□ -0.92
SHMT2-234ENST00000557703 RYR2Q92736 4967 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 IBA57-AS1B1ANH7 110 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 I3L3M4 83 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 VCYO14598 125 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 CKS2P33552 79 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 POLR2KP53803 58 aaKnown RBP9.29□□□□□ -0.92
SHMT2-234ENST00000557703 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
SHMT2-234ENST00000557703 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
SHMT2-234ENST00000557703 A0A1B0GUV1 79 aa9.28□□□□□ -0.92
SHMT2-234ENST00000557703 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
SHMT2-234ENST00000557703 ORMDL3Q8N138 153 aa9.28□□□□□ -0.92
SHMT2-234ENST00000557703 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
SHMT2-234ENST00000557703 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
SHMT2-234ENST00000557703 PMCHP20382 165 aa9.27□□□□□ -0.93
SHMT2-234ENST00000557703 SMAGPQ0VAQ4 97 aa9.27□□□□□ -0.93
SHMT2-234ENST00000557703 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms