RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 ANKRD36BQ8N2N9 1353 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 CACNA1DQ01668 2161 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 PTPRFP10586 1907 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 A0A087WSZ3 146 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 PROSCO94903 275 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 NMBP08949 121 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 LINC00032P0C843 101 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 MIFP14174 115 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 KRTAP10-10P60014 251 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 CASC2Q6XLA1 102 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 OR8B3Q8NGG8 313 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 SMIM7Q9BQ49 75 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 PRO3102Q9H379 93 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 LHFPL6Q9Y693 200 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 KIAA1549LQ6ZVL6 1849 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 ITPR1Q14643 2758 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 RRBP1Q9P2E9 1410 aaKnown RBP1.88□□□□□ -2.11
FOXN3-217ENST00000557572 UBR1Q8IWV7 1749 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 PLXNA4Q9HCM2 1894 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 VPS13AQ96RL7 3174 aa1.88□□□□□ -2.11
FOXN3-217ENST00000557572 MYH8P13535 1937 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 SYCP2Q9BX26 1530 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 COL11A1P12107 1806 aaPredicted RBP1.87□□□□□ -2.11
FOXN3-217ENST00000557572 SNRNP200O75643 2136 aaKnown RBP1.87□□□□□ -2.11
FOXN3-217ENST00000557572 IGLV10-54A0A075B6I4 117 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 K7EP34 96 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 GNGT2O14610 69 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 TRIOO75962 3097 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 UBL3O95164 117 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 BAALC-AS2P0C853 105 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 MIR22HGQ0VDD5 57 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 EEA1Q15075 1411 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 SPANXN5Q5MJ07 72 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 C12orf73Q69YU5 71 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 SPINT4Q6UDR6 99 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 DYNLRB2Q8TF09 96 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 C10orf82Q8WW14 230 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 LINC00052Q96N35 136 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 SCRT1Q9BWW7 348 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 BET1LQ9NYM9 111 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 LINC00474Q9P2X8 69 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 USP24Q9UPU5 2620 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 MYO9AB2RTY4 2548 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 LRRC37A3O60309 1634 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 C1orf167Q5SNV9 1468 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 DSPP15924 2871 aaKnown RBP1.87□□□□□ -2.11
FOXN3-217ENST00000557572 PSME4Q14997 1843 aa1.87□□□□□ -2.11
FOXN3-217ENST00000557572 PLCH1Q4KWH8 1693 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 ANK1P16157 1881 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 TRAV10A0A0B4J240 114 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 UBE2L5PA0A1B0GUS4 154 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 A0A1W2PNM2 257 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 hADV29S1A0JD25 119 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 SSSCA1O60232 199 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 NUPR1O60356 82 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 TFF1P04155 84 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 SLC25A6P12236 298 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 HRES1P13985 223 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 UBE2G1P62253 170 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 UBE2L3P68036 154 aaKnown RBP1.86□□□□□ -2.11
FOXN3-217ENST00000557572 DCDP81605 110 aaKnown RBP1.86□□□□□ -2.11
FOXN3-217ENST00000557572 SPANXN1Q5VSR9 72 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 MED9Q9NWA0 146 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 MAP1BP46821 2468 aaKnown RBP1.86□□□□□ -2.11
FOXN3-217ENST00000557572 LAMC1P11047 1609 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 PTPN23Q9H3S7 1636 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 ERVK-7P63135 1459 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 NCOR2Q9Y618 2525 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 COL4A5P29400 1685 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 FBN2P35556 2912 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 MYO5CQ9NQX4 1742 aa1.86□□□□□ -2.11
FOXN3-217ENST00000557572 KIAA2026Q5HYC2 2103 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 SAMD9Q5K651 1589 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 ZFYVE26Q68DK2 2539 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 HFM1A2PYH4 1435 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 UBR5O95071 2799 aaPredicted RBP1.85□□□□□ -2.11
FOXN3-217ENST00000557572 TENM4Q6N022 2769 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 TRAV12-1A0A0B4J245 112 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 CCKP06307 115 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 PIPP12273 146 aaPredicted RBP1.85□□□□□ -2.11
FOXN3-217ENST00000557572 RHOHQ15669 191 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 IQCJQ1A5X6 159 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 TMEM141Q96I45 108 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 PMCHL2Q9BQD1 86 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 C20orf78Q9BR46 151 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 HIGD2AQ9BW72 106 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 RIF1Q5UIP0 2472 aaKnown RBP1.85□□□□□ -2.11
FOXN3-217ENST00000557572 PKD1L3Q7Z443 1732 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 SDK2Q58EX2 2172 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 PPLO60437 1756 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 LAMB1P07942 1786 aa1.85□□□□□ -2.11
FOXN3-217ENST00000557572 MICAL3Q7RTP6 2002 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 DNAH14Q0VDD8 3507 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 NUMA1Q14980 2115 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 PTPRDP23468 1912 aa1.84□□□□□ -2.11
FOXN3-217ENST00000557572 CCDC141Q6ZP82 1450 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms