RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 H7C1H1 209 aa13.32□□□□□ -0.28
HIF1A-211ENST00000557446 SMDT1Q9H4I9 107 aa13.32□□□□□ -0.28
HIF1A-211ENST00000557446 OSTCQ9NRP0 149 aa13.32□□□□□ -0.28
HIF1A-211ENST00000557446 IBA57-AS1B1ANH7 110 aa13.31□□□□□ -0.28
HIF1A-211ENST00000557446 M0QY20 66 aa13.31□□□□□ -0.28
HIF1A-211ENST00000557446 TMEM241Q24JQ0 296 aa13.31□□□□□ -0.28
HIF1A-211ENST00000557446 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
HIF1A-211ENST00000557446 ISOC2Q96AB3 205 aa13.31□□□□□ -0.28
HIF1A-211ENST00000557446 PGLYRP4Q96LB8 373 aa13.31□□□□□ -0.28
HIF1A-211ENST00000557446 RPL23P62829 140 aaKnown RBP13.3□□□□□ -0.28
HIF1A-211ENST00000557446 C15orf54Q8N8G6 183 aa13.3□□□□□ -0.28
HIF1A-211ENST00000557446 NAT8Q9UHE5 227 aa13.3□□□□□ -0.28
HIF1A-211ENST00000557446 ADIRFQ15847 76 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 NIT1Q86X76 327 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 Q9HAA7 133 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 URGCP-MRPS24S4R325 110 aa13.29□□□□□ -0.28
HIF1A-211ENST00000557446 TRBV6-8A0A0A6YYG3 113 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 RAB14P61106 215 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 LAGE3Q14657 143 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 RASL11AQ6T310 242 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
HIF1A-211ENST00000557446 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
HIF1A-211ENST00000557446 V9GYV3 84 aa13.28□□□□□ -0.28
HIF1A-211ENST00000557446 FOXA3P55318 350 aaPredicted RBP13.27□□□□□ -0.29
HIF1A-211ENST00000557446 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.29
HIF1A-211ENST00000557446 C16orf90A8MZG2 172 aa13.26□□□□□ -0.29
HIF1A-211ENST00000557446 PKD1P98161 4303 aa13.26□□□□□ -0.29
HIF1A-211ENST00000557446 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
HIF1A-211ENST00000557446 FAM231BA6NCW3 169 aa13.25□□□□□ -0.29
HIF1A-211ENST00000557446 PSCAO43653 123 aa13.25□□□□□ -0.29
HIF1A-211ENST00000557446 KCNIP4Q6PIL6 250 aa13.25□□□□□ -0.29
HIF1A-211ENST00000557446 CHCHD7Q9BUK0 85 aa13.25□□□□□ -0.29
HIF1A-211ENST00000557446 A0A087WX48 190 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 A0A1B0GUT8 65 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 EREGO14944 169 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 KRTAP10-2P60368 255 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 NIT2Q9NQR4 276 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 PKHD1P08F94 4074 aa13.24□□□□□ -0.29
HIF1A-211ENST00000557446 A0A087WTM6 91 aa13.23□□□□□ -0.29
HIF1A-211ENST00000557446 TRAV26-2A0A0B4J265 109 aa13.23□□□□□ -0.29
HIF1A-211ENST00000557446 CHCHD5Q9BSY4 110 aa13.23□□□□□ -0.29
HIF1A-211ENST00000557446 TRAV8-3A0A0A6YYJ7 113 aa13.22□□□□□ -0.29
HIF1A-211ENST00000557446 TMEM262E9PQX1 116 aa13.22□□□□□ -0.29
HIF1A-211ENST00000557446 GATD1Q8NB37 220 aa13.22□□□□□ -0.29
HIF1A-211ENST00000557446 KLK12Q9UKR0 248 aa13.22□□□□□ -0.29
HIF1A-211ENST00000557446 TRBV25-1A0A075B6N4 114 aa13.21□□□□□ -0.29
HIF1A-211ENST00000557446 CLLU1Q5K131 121 aa13.21□□□□□ -0.29
HIF1A-211ENST00000557446 NUP35Q8NFH5 326 aa13.21□□□□□ -0.29
HIF1A-211ENST00000557446 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 PKIAP61925 76 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 ELOBQ15370 118 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 MPV17L2Q567V2 206 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 FRZBQ92765 325 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
HIF1A-211ENST00000557446 IFITM2Q01629 132 aa13.19□□□□□ -0.3
HIF1A-211ENST00000557446 IQCJQ1A5X6 159 aa13.19□□□□□ -0.3
HIF1A-211ENST00000557446 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
HIF1A-211ENST00000557446 TM2D2Q9BX73 214 aa13.19□□□□□ -0.3
HIF1A-211ENST00000557446 DNAH11Q96DT5 4516 aa13.18□□□□□ -0.3
HIF1A-211ENST00000557446 RIGQ13278 110 aa13.18□□□□□ -0.3
HIF1A-211ENST00000557446 UBE2WQ96B02 151 aa13.18□□□□□ -0.3
HIF1A-211ENST00000557446 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
HIF1A-211ENST00000557446 DYNC1H1Q14204 4646 aaKnown RBP13.18□□□□□ -0.3
HIF1A-211ENST00000557446 SMIM27A0A1W2PRY6 76 aa13.17□□□□□ -0.3
HIF1A-211ENST00000557446 FUSP35637 526 aaKnown RBP eCLIP13.17□□□□□ -0.3
HIF1A-211ENST00000557446 GAGE6Q13070 117 aa13.17□□□□□ -0.3
HIF1A-211ENST00000557446 ATRAIDQ6UW56 229 aa13.17□□□□□ -0.3
HIF1A-211ENST00000557446 Q8N976 141 aa13.17□□□□□ -0.3
HIF1A-211ENST00000557446 DEFB104AQ8WTQ1 72 aa13.17□□□□□ -0.3
HIF1A-211ENST00000557446 LRCOL1A6NCL2 159 aa13.16□□□□□ -0.3
HIF1A-211ENST00000557446 ANGP03950 147 aaKnown RBP13.16□□□□□ -0.3
HIF1A-211ENST00000557446 COTL1Q14019 142 aa13.16□□□□□ -0.3
HIF1A-211ENST00000557446 RMI2Q96E14 147 aa13.16□□□□□ -0.3
HIF1A-211ENST00000557446 TMEM243Q9BU79 118 aa13.16□□□□□ -0.3
HIF1A-211ENST00000557446 CRPP02741 224 aa13.15□□□□□ -0.3
HIF1A-211ENST00000557446 CDPF1Q6NVV7 123 aa13.15□□□□□ -0.3
HIF1A-211ENST00000557446 AMN1Q8IY45 258 aa13.15□□□□□ -0.3
HIF1A-211ENST00000557446 RNF185Q96GF1 192 aa13.15□□□□□ -0.3
HIF1A-211ENST00000557446 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
HIF1A-211ENST00000557446 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
HIF1A-211ENST00000557446 RBX1P62877 108 aa13.14□□□□□ -0.31
HIF1A-211ENST00000557446 Q0VG73 95 aa13.14□□□□□ -0.31
HIF1A-211ENST00000557446 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
HIF1A-211ENST00000557446 RAB4AP20338 218 aa13.13□□□□□ -0.31
HIF1A-211ENST00000557446 AMTP48728 403 aa13.13□□□□□ -0.31
HIF1A-211ENST00000557446 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
HIF1A-211ENST00000557446 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
HIF1A-211ENST00000557446 GAS8-AS1O95177 125 aa13.12□□□□□ -0.31
HIF1A-211ENST00000557446 PNRC1Q12796 327 aaPredicted RBP13.12□□□□□ -0.31
HIF1A-211ENST00000557446 ENHOQ6UWT2 76 aa13.12□□□□□ -0.31
HIF1A-211ENST00000557446 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
HIF1A-211ENST00000557446 UBE2L6O14933 153 aa13.11□□□□□ -0.31
HIF1A-211ENST00000557446 CAMPP49913 170 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms