RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
PCNX4-213ENST00000556907 SMKR1H3BMG3 65 aa11.52□□□□□ -0.57
PCNX4-213ENST00000556907 NRACQ8N912 160 aa11.52□□□□□ -0.57
PCNX4-213ENST00000556907 ZNF479Q96JC4 524 aa11.52□□□□□ -0.57
PCNX4-213ENST00000556907 DYNC2H1Q8NCM8 4307 aaKnown RBP11.51□□□□□ -0.57
PCNX4-213ENST00000556907 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 NPYP01303 97 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 OR10J3Q5JRS4 329 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 C18orf32Q8TCD1 76 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 TENM2Q9NT68 2774 aa11.51□□□□□ -0.57
PCNX4-213ENST00000556907 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 F5H697 171 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 H7C1H1 209 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 M0QY20 66 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 GAS8-AS1O95177 125 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 PPP1R17O96001 155 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 HOXA5P20719 270 aa11.5□□□□□ -0.57
PCNX4-213ENST00000556907 TMA7Q9Y2S6 64 aaKnown RBP11.5□□□□□ -0.57
PCNX4-213ENST00000556907 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
PCNX4-213ENST00000556907 GATA1P15976 413 aaPredicted RBP11.49□□□□□ -0.57
PCNX4-213ENST00000556907 Q0VG73 95 aa11.49□□□□□ -0.57
PCNX4-213ENST00000556907 FHL2Q14192 279 aa11.49□□□□□ -0.57
PCNX4-213ENST00000556907 HHLA3Q9XRX5 114 aa11.49□□□□□ -0.57
PCNX4-213ENST00000556907 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
PCNX4-213ENST00000556907 K7EQD1 137 aa11.48□□□□□ -0.57
PCNX4-213ENST00000556907 PLECQ15149 4684 aaKnown RBP11.47□□□□□ -0.57
PCNX4-213ENST00000556907 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 CRYBA4P53673 196 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 IQCJQ1A5X6 159 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
PCNX4-213ENST00000556907 LGALS9CQ6DKI2 356 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 Q6ZSN1 163 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
PCNX4-213ENST00000556907 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
PCNX4-213ENST00000556907 TRBV10-1A0A0K0K1A3 114 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 PAX4O43316 350 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 P0DMU3 169 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 FAM231AP0DMU4 169 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 FAM231CP0DMU5 169 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
PCNX4-213ENST00000556907 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
PCNX4-213ENST00000556907 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
PCNX4-213ENST00000556907 RHOHQ15669 191 aa11.45□□□□□ -0.58
PCNX4-213ENST00000556907 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
PCNX4-213ENST00000556907 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
PCNX4-213ENST00000556907 NIT2Q9NQR4 276 aa11.45□□□□□ -0.58
PCNX4-213ENST00000556907 LCE6AA0A183 80 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 LINC00310P59036 64 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 SLC25A29Q8N8R3 303 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 NEXN-AS1Q8NBZ9 246 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 VSIG2Q96IQ7 327 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
PCNX4-213ENST00000556907 A0A0J9YY99 117 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 NUDT3O95989 172 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 S100A6P06703 90 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 PMCHP20382 165 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 NDUFA6P56556 154 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 MRPL23Q16540 153 aaKnown RBP11.43□□□□□ -0.58
PCNX4-213ENST00000556907 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 PRADC1Q9BSG0 188 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 NXT2Q9NPJ8 142 aaKnown RBP11.43□□□□□ -0.58
PCNX4-213ENST00000556907 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
PCNX4-213ENST00000556907 IGLV2-18A0A075B6J9 118 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 BAGE3Q86Y29 109 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 Q8N8P6 123 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 URB1-AS1Q96HZ7 61 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
PCNX4-213ENST00000556907 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
PCNX4-213ENST00000556907 LINC01546A6NGU7 62 aa11.41□□□□□ -0.58
PCNX4-213ENST00000556907 SERF1AO75920 110 aa11.41□□□□□ -0.58
PCNX4-213ENST00000556907 ESDP10768 282 aa11.41□□□□□ -0.58
PCNX4-213ENST00000556907 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
PCNX4-213ENST00000556907 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
PCNX4-213ENST00000556907 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
PCNX4-213ENST00000556907 LOC389332A0A1B0GUA5 103 aa11.4□□□□□ -0.58
PCNX4-213ENST00000556907 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
PCNX4-213ENST00000556907 CCL18P55774 89 aa11.4□□□□□ -0.58
PCNX4-213ENST00000556907 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
PCNX4-213ENST00000556907 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
PCNX4-213ENST00000556907 FA2HQ7L5A8 372 aa11.4□□□□□ -0.58
PCNX4-213ENST00000556907 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
PCNX4-213ENST00000556907 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.58
PCNX4-213ENST00000556907 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 A0A096LPF7 62 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 K7EMI3 77 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 LY6G6CO95867 125 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 GYPEP15421 78 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 PRSS3P2Q8NHM4 247 aa11.39□□□□□ -0.59
PCNX4-213ENST00000556907 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 LINC00614P0C842 121 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 UBE2D3P61077 147 aa11.38□□□□□ -0.59
PCNX4-213ENST00000556907 UBE2D2P62837 147 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms