RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CDC42BPBQ9Y5S2 1711 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 NUMA1Q14980 2115 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 SLIT2O94813 1529 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1-6A0A0C4DH72 117 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 FAM223BA6NKX1 122 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 H3BRN7 92 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 PGLYRP1O75594 196 aaPredicted RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 EIF4EBP1Q13541 118 aaPredicted RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 KISS1Q15726 138 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 Q6ZTI0 123 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 CRIPTQ9P021 101 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 CEP152O94986 1710 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 LOC101927531A0A1B0GV80 90 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 DNAJC9-AS1A6NH13 148 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 C2orf70A6NJV1 201 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 NREPQ16612 68 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 ODF3L2Q3SX64 289 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 LYPD2Q6UXB3 125 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 USMG5Q96IX5 58 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 FAM167A-AS1Q96KT0 104 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 C11orf1Q9H5F2 150 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 POLEQ07864 2286 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 SPEGQ15772 3267 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 COL11A1P12107 1806 aaPredicted RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 A0A1B0GU69 56 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 SPINK4O60575 86 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 TLX1NBP0CAT3 122 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 PIGYQ3MUY2 71 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 FLVCR1-AS1Q8TAF5 88 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 FAM215AQ9Y5M1 114 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 LOC400499M0QZD8 3231 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 TNRC6AQ8NDV7 1962 aaKnown RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 ZSWIM8A7E2V4 1837 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 SCN4AP35499 1836 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 A0A087X002 238 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 A0A0J9YY99 117 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 H0Y9P7 68 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 CSRP1P21291 193 aaKnown RBP1.31□□□□□ -2.2
KTN1-224ENST00000556631 MGAQ8IWI9 3026 aa1.31□□□□□ -2.2
KTN1-224ENST00000556631 J3QRE1 110 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1-16P04430 117 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 MDKP21741 143 aaPredicted RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 AMELXQ99217 191 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 RNF5Q99942 180 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 FAM19A2Q8N3H0 131 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 C5orf56Q8N8D9 126 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 LRRK1Q38SD2 2015 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 GOLGA4Q13439 2230 aaKnown RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 NRXN2Q9P2S2 1712 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1-9A0A0C4DH69 117 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1-12A0A0C4DH73 117 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 SDHAF1A6NFY7 115 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1D-12P01611 117 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGLV2-23P01705 113 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 RNASE4P34096 147 aaKnown RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 TFF2Q03403 129 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 SSBP3-AS1Q7Z2R9 100 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 C17orf82Q86X59 251 aaPredicted RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 TMEM263Q8WUH6 116 aaKnown RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 COL3A1P02461 1466 aaPredicted RBP1.3□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1D-43A0A0B4J1Z2 117 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 C19orf71A6NCJ1 209 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 LPAL2Q16609 132 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 PRXQ9BXM0 1461 aa1.3□□□□□ -2.2
KTN1-224ENST00000556631 CPSF4LA6NMK7 179 aaKnown RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 IGKV1-17P01599 117 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 C9orf129Q5T035 196 aaKnown RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 Q8N814 137 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 CIRBP-AS1Q8TBR5 109 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 RNASE6Q93091 150 aaKnown RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 LINC00588Q9Y4M8 146 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 TOGARAM1Q9Y4F4 1720 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 TRBV6-4A0A1B0GX49 114 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 NDUFA3O95167 84 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 DNAH10OSP0CZ25 163 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 SPTBP11277 2137 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 Q1T7F1 81 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 C1orf137Q5JT78 98 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 KLF14Q8TD94 323 aaPredicted RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 TP53TG3Q9ULZ0 132 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 SMAD5-AS1Q9Y6J3 95 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 YLPM1P49750 1951 aaKnown RBP1.29□□□□□ -2.2
KTN1-224ENST00000556631 A0A087WVE0 104 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 HMGN4O00479 90 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 IGLV3-1P01715 115 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 FXYD4P59646 89 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 Q6ZR54 194 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 HEATR5BQ9P2D3 2071 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 SPEF2Q9C093 1822 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 BCORQ6W2J9 1755 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 A0A096LNJ9 63 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 IGLV3-19P01714 112 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 COA5Q86WW8 74 aa1.29□□□□□ -2.2
KTN1-224ENST00000556631 PRRC2BQ5JSZ5 2229 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms