RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ELANEP08246 267 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 SPXQ9BT56 116 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 TRGV1A0A0A0MS02 117 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 NPC2P61916 151 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 RRN3P1Q2M238 152 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
NEK9-209ENST00000556170 LINC01619G3V211 115 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 RPL35AP18077 110 aaKnown RBP11.18□□□□□ -0.62
NEK9-209ENST00000556170 GPHB5Q86YW7 130 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 RASL10AQ92737 203 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 U3KQK5 164 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 FLNBO75369 2602 aaKnown RBP11.18□□□□□ -0.62
NEK9-209ENST00000556170 TSPAN13O95857 204 aa11.18□□□□□ -0.62
NEK9-209ENST00000556170 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 J3QLI3 93 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 GAGE7O76087 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 GAGE12FP0CL80 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 GAGE12GP0CL81 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 GAGE12IP0CL82 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 GAGE4Q13068 117 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 DEFB113Q30KQ7 82 aa11.17□□□□□ -0.62
NEK9-209ENST00000556170 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
NEK9-209ENST00000556170 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
NEK9-209ENST00000556170 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
NEK9-209ENST00000556170 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
NEK9-209ENST00000556170 U3KQE9 123 aa11.16□□□□□ -0.62
NEK9-209ENST00000556170 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
NEK9-209ENST00000556170 PAPPA-AS1Q5QFB9 102 aa11.16□□□□□ -0.62
NEK9-209ENST00000556170 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
NEK9-209ENST00000556170 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 ADARB2-AS1A8MUL3 147 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 CFHR3Q02985 330 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 ITPR1Q14643 2758 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 PMVKQ15126 192 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
NEK9-209ENST00000556170 A0A0J9YX75 114 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 K7EMT4 169 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 C2orf91Q6ZV80 131 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
NEK9-209ENST00000556170 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 SRSF2Q01130 221 aaKnown RBP11.14□□□□□ -0.63
NEK9-209ENST00000556170 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 NRACQ8N912 160 aa11.14□□□□□ -0.63
NEK9-209ENST00000556170 PF4P02776 101 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
NEK9-209ENST00000556170 P0DMU3 169 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
NEK9-209ENST00000556170 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
NEK9-209ENST00000556170 PSMB8P28062 276 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 CEND1Q8N111 149 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 C1QTNF4Q9BXJ3 329 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 ITPR3Q14573 2671 aa11.12□□□□□ -0.63
NEK9-209ENST00000556170 UBE2L6O14933 153 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 WFDC11Q8NEX6 87 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
NEK9-209ENST00000556170 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 IGLV1-40P01703 118 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 MT-ATP8P03928 68 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 BBC3Q96PG8 261 aaPredicted RBP11.11□□□□□ -0.63
NEK9-209ENST00000556170 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
NEK9-209ENST00000556170 INSP01308 110 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 IGHV4-31P0DP07 118 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 TOMM7Q9P0U1 55 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 I3L3M4 83 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 FGF6P10767 208 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 IGLL5B9A064 214 aa11.1□□□□□ -0.63
NEK9-209ENST00000556170 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 SIVA1O15304 175 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 C12orf74Q32Q52 190 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
NEK9-209ENST00000556170 K7EQG2 157 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 TRBV7-9A0A0J9YWB2 115 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 A0A0J9YXV3 536 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 IFITM1P13164 125 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 C9JAW5 83 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
NEK9-209ENST00000556170 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
NEK9-209ENST00000556170 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
NEK9-209ENST00000556170 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
NEK9-209ENST00000556170 PROK1P58294 105 aa11.08□□□□□ -0.64
NEK9-209ENST00000556170 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms