RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
SNX6-206ENST00000556162 TMEM242Q9NWH2 141 aa9.78□□□□□ -0.84
SNX6-206ENST00000556162 RYR2Q92736 4967 aa9.78□□□□□ -0.84
SNX6-206ENST00000556162 TRBV7-3A0A075B6L6 115 aa9.77□□□□□ -0.85
SNX6-206ENST00000556162 SNAPINO95295 136 aa9.77□□□□□ -0.85
SNX6-206ENST00000556162 KCNIP4Q6PIL6 250 aa9.77□□□□□ -0.85
SNX6-206ENST00000556162 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
SNX6-206ENST00000556162 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
SNX6-206ENST00000556162 A0A087WWC5 75 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 HBBP68871 147 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 NEXN-AS1Q8NBZ9 246 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 BTF3L4Q96K17 158 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 KMT2AQ03164 3969 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 LINC00694P0DN24 101 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
SNX6-206ENST00000556162 S100PP25815 95 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.75□□□□□ -0.85
SNX6-206ENST00000556162 GATD1Q8NB37 220 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 FRZBQ92765 325 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 NIT2Q9NQR4 276 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 MRPS16Q9Y3D3 137 aaKnown RBP9.75□□□□□ -0.85
SNX6-206ENST00000556162 RYR3Q15413 4870 aa9.75□□□□□ -0.85
SNX6-206ENST00000556162 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 RAB4AP20338 218 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 TIRAPP58753 221 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 UBE2D3P61077 147 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 UBE2D2P62837 147 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 FAM104BQ5XKR9 115 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
SNX6-206ENST00000556162 TMA7Q9Y2S6 64 aaKnown RBP9.73□□□□□ -0.85
SNX6-206ENST00000556162 TRAV9-1A0A075B6T8 112 aa9.72□□□□□ -0.85
SNX6-206ENST00000556162 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
SNX6-206ENST00000556162 Q9H8V8 135 aa9.72□□□□□ -0.85
SNX6-206ENST00000556162 URGCP-MRPS24S4R325 110 aa9.72□□□□□ -0.85
SNX6-206ENST00000556162 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
SNX6-206ENST00000556162 DAZ4Q86SG3 579 aaKnown RBP9.72□□□□□ -0.85
SNX6-206ENST00000556162 DAZ3Q9NR90 486 aaKnown RBP9.72□□□□□ -0.85
SNX6-206ENST00000556162 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.85
SNX6-206ENST00000556162 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.85
SNX6-206ENST00000556162 LELP1Q5T871 98 aa9.71□□□□□ -0.85
SNX6-206ENST00000556162 IGHV3-38A0A0C4DH36 116 aa9.7□□□□□ -0.86
SNX6-206ENST00000556162 SIVA1O15304 175 aa9.7□□□□□ -0.86
SNX6-206ENST00000556162 MRPL51Q4U2R6 128 aaKnown RBP9.7□□□□□ -0.86
SNX6-206ENST00000556162 RPL39LQ96EH5 51 aaKnown RBP9.7□□□□□ -0.86
SNX6-206ENST00000556162 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
SNX6-206ENST00000556162 PPP1R17O96001 155 aa9.69□□□□□ -0.86
SNX6-206ENST00000556162 CKS2P33552 79 aa9.69□□□□□ -0.86
SNX6-206ENST00000556162 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
SNX6-206ENST00000556162 SMKR1H3BMG3 65 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 ST20Q9HBF5 79 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 NCR2O95944 276 aa9.68□□□□□ -0.86
SNX6-206ENST00000556162 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
SNX6-206ENST00000556162 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
SNX6-206ENST00000556162 M0R2N4 97 aa9.67□□□□□ -0.86
SNX6-206ENST00000556162 PPBPP02775 128 aa9.67□□□□□ -0.86
SNX6-206ENST00000556162 RPS10P46783 165 aaKnown RBP9.67□□□□□ -0.86
SNX6-206ENST00000556162 ATRAIDQ6UW56 229 aa9.67□□□□□ -0.86
SNX6-206ENST00000556162 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
SNX6-206ENST00000556162 D6R8Y8 96 aa9.66□□□□□ -0.86
SNX6-206ENST00000556162 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
SNX6-206ENST00000556162 NRACQ8N912 160 aa9.66□□□□□ -0.86
SNX6-206ENST00000556162 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 TRAV9-2A0A087WT02 112 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 SCO1O75880 301 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 PMCHP20382 165 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 COTL1Q14019 142 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 ELOBQ15370 118 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 COX19Q49B96 90 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 ORMDL3Q8N138 153 aa9.65□□□□□ -0.86
SNX6-206ENST00000556162 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 I3L3M4 83 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 TMEM70Q9BUB7 260 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 TNFRSF6BO95407 300 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 HLA-DQA1P01909 254 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
SNX6-206ENST00000556162 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
SNX6-206ENST00000556162 Q6ZR54 194 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 DEFB104AQ8WTQ1 72 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 SMCO4Q9NRQ5 59 aa9.64□□□□□ -0.87
SNX6-206ENST00000556162 K7EP13 123 aa9.63□□□□□ -0.87
SNX6-206ENST00000556162 VCYO14598 125 aa9.63□□□□□ -0.87
SNX6-206ENST00000556162 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
SNX6-206ENST00000556162 LINC01556Q5JQF7 62 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms