RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 PHIPQ8WWQ0 1821 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 A0A1B0GW64 132 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 PFDN1O60925 122 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 COX6B1P14854 86 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 EDDM3BP56851 147 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 KLK9Q2XQG4 91 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 TOMM20LQ6UXN7 152 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 TMEM91Q6ZNR0 172 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 BAGE3Q86Y29 109 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 STX12Q86Y82 276 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 DEFB123Q8N688 67 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 IFI27L1Q96BM0 104 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 CCDC32Q9BV29 185 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 LINC00472Q9H8W2 130 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 CBLN4Q9NTU7 201 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 SIPA1L3O60292 1781 aaPredicted RBP-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 BICRAQ9NZM4 1560 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 ROCK1Q13464 1354 aa-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 IBTKQ9P2D0 1353 aaPredicted RBP-0.58□□□□□ -2.5
LINC00871-202ENST00000556071 PLXNB2O15031 1838 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 WDR7Q9Y4E6 1490 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 LRRC37A3O60309 1634 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 RYR1P21817 5038 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 TRAV12-3A0A0B4J271 114 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 TRBV6-1A0A0K0K1D8 114 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 LOC730098B7Z3J9 87 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 E7EQ34 232 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 SLC25A5P05141 298 aaKnown RBP-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 SPRR1BP22528 89 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 POLR2HP52434 150 aaKnown RBP-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 PCBD1P61457 104 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 NPC2P61916 151 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 RPS28P62857 69 aaKnown RBP-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 PSPHP78330 225 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 PIGYQ3MUY2 71 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 OR9Q1Q8NGQ5 310 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 THEM6Q8WUY1 208 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 MAGOHBQ96A72 148 aaKnown RBP-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 SDF2Q99470 211 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 SLC35B3Q9H1N7 401 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 ATPIF1Q9UII2 106 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 WNK3Q9BYP7 1800 aa-0.59□□□□□ -2.5
LINC00871-202ENST00000556071 PRKDCP78527 4128 aaKnown RBP-0.6□□□□□ -2.5
LINC00871-202ENST00000556071 LRRC37A2A6NM11 1700 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 TRAV1-2A0A0B4J238 106 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 A0A1W2PRE2 83 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 CLPSL1A2RUU4 121 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 NPFFO15130 113 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 BCE1O60756 84 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 RBP4P02753 201 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 MT1AP04731 61 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 PIRTP0C851 137 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 PPP1R2P3Q6NXS1 205 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 ZNF818PQ6ZRF7 136 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 CCDC115Q96NT0 180 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 SPRR2FQ96RM1 72 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 NOP16Q9Y3C1 178 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 DNAJC15Q9Y5T4 150 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 LRP6O75581 1613 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 RYR3Q15413 4870 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 SONP18583 2426 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 DNAH6Q9C0G6 4158 aa-0.6□□□□□ -2.51
LINC00871-202ENST00000556071 NRXN2Q9P2S2 1712 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 KIF13AQ9H1H9 1805 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 BORCS7-ASMTA0A0B4J1R7 106 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 J3KT08 172 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 J3QLW9 94 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 IFNA17P01571 189 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 TCRAP04437 139 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SCTP09683 121 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SMIM6P0DI80 62 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 HLA-DRB4P13762 266 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 UBE2D1P51668 147 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 TRIQKQ629K1 86 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SPAG11AQ6PDA7 123 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SMIM4Q8WVI0 70 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SCN3BQ9NY72 215 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 SPANXCQ9NY87 97 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 HLA-DRB4X5D2U9 266 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 KIAA1109Q2LD37 5005 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 PAPPAQ13219 1627 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 TACC2O95359 2948 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 PARP14Q460N5 1801 aa-0.61□□□□□ -2.51
LINC00871-202ENST00000556071 DAPK1P53355 1430 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 FXYD6-FXYD2A0A087WZ82 144 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 SMIM24O75264 130 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 CCL18P55774 89 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 ALX1Q15699 326 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 C9orf116Q5BN46 136 aaPredicted RBP-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 SPANXN1Q5VSR9 72 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 LINC01545Q5VT33 79 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 CFAP126Q5VTH2 177 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 SNX29P2Q8IUI4 249 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 CDC26Q8NHZ8 85 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 AGPAT4-IT1Q9H0P7 198 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 IFT172Q9UG01 1749 aa-0.62□□□□□ -2.51
LINC00871-202ENST00000556071 MRC1P22897 1456 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms