RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 U3KQE9 123 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 IGSF10Q6WRI0 2623 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
PPP4R3A-208ENST00000555462 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 A0A1B0GV72 72 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 TMEM238LA0A1B0GVL6 79 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 A6NJY4 79 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 J3QQQ9 107 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 PMVKQ15126 192 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 TAL2Q16559 108 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 ANKRD29Q8N6D5 301 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 COX6B1P14854 86 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 Q8N1Y9 231 aa12.73□□□□□ -0.37
PPP4R3A-208ENST00000555462 NOTCH2Q04721 2471 aa12.72□□□□□ -0.37
PPP4R3A-208ENST00000555462 LINC00315P59091 139 aa12.72□□□□□ -0.37
PPP4R3A-208ENST00000555462 OVOL1O14753 267 aa12.72□□□□□ -0.37
PPP4R3A-208ENST00000555462 HERVK_113P61574 105 aa12.72□□□□□ -0.37
PPP4R3A-208ENST00000555462 ZNF876PQ49A33 203 aa12.72□□□□□ -0.37
PPP4R3A-208ENST00000555462 DOPEY1Q5JWR5 2465 aa12.71□□□□□ -0.37
PPP4R3A-208ENST00000555462 IGHV4-4A0A075B6R2 117 aa12.71□□□□□ -0.37
PPP4R3A-208ENST00000555462 MUSTN1Q8IVN3 82 aa12.71□□□□□ -0.37
PPP4R3A-208ENST00000555462 ZNF625Q96I27 306 aaPredicted RBP12.71□□□□□ -0.37
PPP4R3A-208ENST00000555462 IGIPA6NJ69 53 aa12.71□□□□□ -0.38
PPP4R3A-208ENST00000555462 SPATA25Q9BR10 227 aa12.71□□□□□ -0.38
PPP4R3A-208ENST00000555462 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 CRYBA4P53673 196 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 SOCS3O14543 225 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 AVPP01185 164 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 KLRB1Q12918 225 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
PPP4R3A-208ENST00000555462 UBE2D1P51668 147 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV1-69DA0A0B4J2H0 117 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 EIF4EBP3O60516 100 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV1-69P01742 117 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 VCYO14598 125 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV3-30P01768 117 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV3-30-5P0DP03 117 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
PPP4R3A-208ENST00000555462 A8MWV9 139 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 Q6ZUT4 128 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 RNF183Q96D59 192 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 HIVEP2P31629 2446 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 NDUFA4O00483 81 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 GNLYP22749 145 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 PRO1854Q9UHT4 67 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
PPP4R3A-208ENST00000555462 POLR2KP53803 58 aaKnown RBP12.67□□□□□ -0.38
PPP4R3A-208ENST00000555462 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 C10orf126Q8N4M7 172 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 TMEM190Q8WZ59 177 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 FAM223BA6NKX1 122 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 FAM223AQ8IWN6 122 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 VCX2Q9H322 139 aa12.66□□□□□ -0.38
PPP4R3A-208ENST00000555462 SLC25A20O43772 301 aa12.65□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
PPP4R3A-208ENST00000555462 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
PPP4R3A-208ENST00000555462 GCN1Q92616 2671 aaKnown RBP12.65□□□□□ -0.38
PPP4R3A-208ENST00000555462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 ATP5J2P56134 94 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 SLC25A29Q8N8R3 303 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 SS18L2Q9UHA2 77 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 C11orf44Q8N8P7 122 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
PPP4R3A-208ENST00000555462 CRLF1O75462 422 aa12.63□□□□□ -0.39
PPP4R3A-208ENST00000555462 CD28P10747 220 aa12.63□□□□□ -0.39
PPP4R3A-208ENST00000555462 UBE2D3P61077 147 aa12.63□□□□□ -0.39
PPP4R3A-208ENST00000555462 UBE2D2P62837 147 aa12.63□□□□□ -0.39
PPP4R3A-208ENST00000555462 CLEC2BQ92478 149 aa12.63□□□□□ -0.39
PPP4R3A-208ENST00000555462 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
PPP4R3A-208ENST00000555462 C18orf65Q6ZTR6 163 aa12.62□□□□□ -0.39
PPP4R3A-208ENST00000555462 M0QY20 66 aa12.62□□□□□ -0.39
PPP4R3A-208ENST00000555462 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
PPP4R3A-208ENST00000555462 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
PPP4R3A-208ENST00000555462 ADAMTSL4-AS1Q5T5F5 129 aa12.61□□□□□ -0.39
PPP4R3A-208ENST00000555462 AMELXQ99217 191 aa12.6□□□□□ -0.39
PPP4R3A-208ENST00000555462 ANAPC13Q9BS18 74 aa12.6□□□□□ -0.39
PPP4R3A-208ENST00000555462 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
PPP4R3A-208ENST00000555462 ZNF469Q96JG9 3925 aaPredicted RBP12.6□□□□□ -0.39
PPP4R3A-208ENST00000555462 ID1P41134 155 aa12.6□□□□□ -0.39
PPP4R3A-208ENST00000555462 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
PPP4R3A-208ENST00000555462 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
PPP4R3A-208ENST00000555462 B5MCH6 92 aa12.59□□□□□ -0.39
PPP4R3A-208ENST00000555462 KLLNB2CW77 178 aa12.59□□□□□ -0.39
PPP4R3A-208ENST00000555462 Q6ZSN1 163 aa12.59□□□□□ -0.39
PPP4R3A-208ENST00000555462 IGHV3-33P01772 117 aa12.58□□□□□ -0.39
PPP4R3A-208ENST00000555462 IGHG2P01859 326 aa12.58□□□□□ -0.39
PPP4R3A-208ENST00000555462 RHODO00212 210 aa12.58□□□□□ -0.4
PPP4R3A-208ENST00000555462 NDUFA7O95182 113 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms