RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 H3BRM9 83 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 NMUP48645 174 aa12.76□□□□□ -0.37
SHOX-204ENST00000554971 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
SHOX-204ENST00000554971 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
SHOX-204ENST00000554971 GNRH2O43555 120 aa12.75□□□□□ -0.37
SHOX-204ENST00000554971 C7orf71A4D174 169 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 H7C1H1 209 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 K7EQG2 157 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 DUSP14O95147 198 aaKnown RBP12.74□□□□□ -0.37
SHOX-204ENST00000554971 HUWE1Q7Z6Z7 4374 aaKnown RBP12.74□□□□□ -0.37
SHOX-204ENST00000554971 K7EP13 123 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 CD7P09564 240 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 Q6ZVH6 145 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
SHOX-204ENST00000554971 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
SHOX-204ENST00000554971 A0A0J9YX75 114 aa12.73□□□□□ -0.37
SHOX-204ENST00000554971 PCP2Q8IVA1 136 aa12.73□□□□□ -0.37
SHOX-204ENST00000554971 Q8N1Y9 231 aa12.73□□□□□ -0.37
SHOX-204ENST00000554971 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
SHOX-204ENST00000554971 CBY3A6NI87 242 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 F8VRH5 84 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 K7EIL1 84 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 DEFB1P60022 68 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
SHOX-204ENST00000554971 WFDC10AQ9H1F0 79 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
SHOX-204ENST00000554971 MGPP08493 103 aa12.71□□□□□ -0.37
SHOX-204ENST00000554971 LINC00315P59091 139 aa12.71□□□□□ -0.37
SHOX-204ENST00000554971 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 TAL2Q16559 108 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 ERASQ7Z444 233 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 SYT8Q8NBV8 401 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 STAB2Q8WWQ8 2551 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 C9orf85Q96MD7 179 aa12.7□□□□□ -0.38
SHOX-204ENST00000554971 VCYO14598 125 aa12.69□□□□□ -0.38
SHOX-204ENST00000554971 CDKN1BP46527 198 aa12.69□□□□□ -0.38
SHOX-204ENST00000554971 C2orf66Q6UXQ4 117 aa12.69□□□□□ -0.38
SHOX-204ENST00000554971 FOXI2Q6ZQN5 318 aa12.69□□□□□ -0.38
SHOX-204ENST00000554971 RPL39LQ96EH5 51 aaKnown RBP12.69□□□□□ -0.38
SHOX-204ENST00000554971 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 TRAV2A0A0B4J234 112 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 TRBV6-5A0A0K0K1A5 114 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 GTSCR1Q86UQ5 136 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 CSTL1Q9H114 145 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 ZNF688P0C7X2 276 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 POLR2KP53803 58 aaKnown RBP12.68□□□□□ -0.38
SHOX-204ENST00000554971 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
SHOX-204ENST00000554971 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
SHOX-204ENST00000554971 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
SHOX-204ENST00000554971 IGHV3-16A0A0C4DH30 117 aa12.67□□□□□ -0.38
SHOX-204ENST00000554971 PAPPA-AS1Q5QFB9 102 aa12.67□□□□□ -0.38
SHOX-204ENST00000554971 GTF2H5Q6ZYL4 71 aa12.67□□□□□ -0.38
SHOX-204ENST00000554971 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 IGHV1OR15-1A0A075B7D0 117 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 TMEM141Q96I45 108 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 KIR2DL4Q99706 377 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 MAP6D1Q9H9H5 199 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 CBY1Q9Y3M2 126 aa12.66□□□□□ -0.38
SHOX-204ENST00000554971 TRAV8-6A0A0B4J262 113 aa12.65□□□□□ -0.38
SHOX-204ENST00000554971 TRGV11A0A075B6L2 103 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 TRBV27A0A0K0K1C4 114 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 IGHV4-30-4P0DP06 118 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 BAALCQ8WXS3 180 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 FAM110AQ9BQ89 295 aa12.64□□□□□ -0.39
SHOX-204ENST00000554971 GAGE10A6NGK3 116 aa12.63□□□□□ -0.39
SHOX-204ENST00000554971 A8MTW9 85 aa12.63□□□□□ -0.39
SHOX-204ENST00000554971 SPRY2O43597 315 aa12.63□□□□□ -0.39
SHOX-204ENST00000554971 TCTAP57738 103 aa12.63□□□□□ -0.39
SHOX-204ENST00000554971 TIMM17AQ99595 171 aa12.63□□□□□ -0.39
SHOX-204ENST00000554971 DEFB131AP59861 70 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 PRSS29PA6NIE9 313 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 ZFP2Q6ZN57 461 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 CEND1Q8N111 149 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
SHOX-204ENST00000554971 E9PLD3 99 aa12.61□□□□□ -0.39
SHOX-204ENST00000554971 F5H697 171 aa12.61□□□□□ -0.39
SHOX-204ENST00000554971 PIK3CD-AS1Q5SR53 167 aa12.61□□□□□ -0.39
SHOX-204ENST00000554971 IGIPA6NJ69 53 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 GCSHP23434 173 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 RHOHQ15669 191 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 TRPT1Q86TN4 253 aaKnown RBP12.6□□□□□ -0.39
SHOX-204ENST00000554971 EDA2RQ9HAV5 297 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 MUC4Q99102 2169 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 A8MZ25 164 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 CRYGDP07320 174 aa12.6□□□□□ -0.39
SHOX-204ENST00000554971 DEFB121Q5J5C9 76 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms