RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
SCFD1-212ENST00000554486 IGHV4-4A0A075B6R2 117 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 SNURFLB1AK76 121 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 F2Z2F3 143 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 M0R2P5 195 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 SSTP61278 116 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 Q6ZTI0 123 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 LINC00612Q8N6U2 182 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 RASL10AQ92737 203 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 YPEL4Q96NS1 127 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 MRPL16Q9NX20 251 aaKnown RBP4.44□□□□□ -1.7
SCFD1-212ENST00000554486 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
SCFD1-212ENST00000554486 A0A1B0GUT8 65 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 A0A1B0GXF2 115 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 LYRM9A8MSI8 78 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 M0R381 172 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 SCO1O75880 301 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
SCFD1-212ENST00000554486 CACNG7P62955 275 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 LGALS9BQ3B8N2 356 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 ZNF876PQ49A33 203 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 SPANXN1Q5VSR9 72 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 NFE4Q86UQ8 179 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 CBLN2Q8IUK8 224 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 ZFP82Q8N141 532 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 JPT2Q9H910 190 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 NAT8BQ9UHF3 227 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 URGCP-MRPS24S4R325 110 aa4.43□□□□□ -1.7
SCFD1-212ENST00000554486 RS1O15537 224 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 CRYGDP07320 174 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 SPART-AS1P0CW21 52 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 DEFB130BP0DP73 79 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 DEFB130AP0DP74 79 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 NTF3P20783 257 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 MT3P25713 68 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 GAGE5Q13069 117 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 GAGE6Q13070 117 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 RIGQ13278 110 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 ELOBQ15370 118 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 C12orf74Q32Q52 190 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 MRPL54Q6P161 138 aaKnown RBP4.42□□□□□ -1.7
SCFD1-212ENST00000554486 Q6ZTC4 211 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 BTF3L4Q96K17 158 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 EDA2RQ9HAV5 297 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 SMCO4Q9NRQ5 59 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 U3KQK5 164 aa4.42□□□□□ -1.7
SCFD1-212ENST00000554486 TRAV9-1A0A075B6T8 112 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 A0A087WYN8 130 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 TGIF2-C20orf24A0A0A6YYL0 155 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 TRAV4A0A0B4J268 109 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 TEX48A0A1B0GUV7 120 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 EVI2AP22794 236 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 S100PP25815 95 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 LINC00315P59091 139 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 DAD1P61803 113 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 CFAP126Q5VTH2 177 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 KCNIP4Q6PIL6 250 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 ATP5L2Q7Z4Y8 100 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 BORCS7Q96B45 105 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 C18orf15Q96N68 181 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
SCFD1-212ENST00000554486 TRBV24-1A0A075B6N3 115 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 TRGV2A0A075B6R0 118 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 IGHV3-73A0A0B4J1V6 119 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 A0A1B0GW15 77 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 A8MWV9 139 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 IGHV3-53P01767 116 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 HBBP68871 147 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 TMEM136Q6ZRR5 245 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-212ENST00000554486 GATD1Q8NB37 220 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 RNF185Q96GF1 192 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
SCFD1-212ENST00000554486 COLCA2A8K830 154 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 VPREB1P12018 145 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-212ENST00000554486 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 ZFP2Q6ZN57 461 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 FAM210BQ96KR6 192 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 TMEM191AQ9H0A3 160 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 DPH3P1Q9H4G8 78 aa4.39□□□□□ -1.71
SCFD1-212ENST00000554486 F5H768 121 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 CIDEAO60543 219 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 S100A8P05109 93 aa4.38□□□□□ -1.71
SCFD1-212ENST00000554486 ATP5G1P05496 136 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms